Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00928 ATGGATTCACTGTCTCTGCTGCTCTCTCCTTATCCACTCTCAAACAAAAACCACCCCAAAACCCAGAAACTCAGCACCTCCAAACCCTTCTCTCTTCTCTCAAACCAGAATCCTCCACACTCTGAAATTCAATTTTCTGCATCTTCCCCTCAACCCCATTTTTCCTCCACCAAGAAAATCCCAGCTTCTTCACTCCAAACCCATTGTCCTAACTCACTTCAAAACCTTCAATTGCTTTTCCGACCCCAAAATCTCTTAACAAAATCTTTCCTTTCATTGGCTCTCTTCACTCCATTTCCATGCCTTGCTGTTGAAACCGCAGCACCCACTTTGGTTGAGTCTGATGCAGGCAAAATCAACTTGGAATCGATTCTGGTTTCTATTGATGACTTTTTCAATCGATACCCTTTTTTTGTTGCTGGATGTACCTTCATTTGGCTAGTTGTTGTTCCTCTGGCAGAAGAGTATTTCAGGAAATACAAGTTTGTGTCAGCCATTGATGCCTTCAGGAAGCTCAGGGATGACCCTGATGCTCAGCTCTTGGACATAAGGGACTTGAAGAACGTGAAGTTTATATGGTCCCCCAATTTGAAAATGTTGGAGAAGGAAACGGTGCAGGTTGAGTTCACTGAGGGAAATGAAGATGGGTTTGTGAAGAAAGTGTTGGAGAGATTCAAGGACCCGCCAAACACTGTTGTCTGTGTTTTGGACAGTTTTGACGGTAATTCCATGAAAGTTGCTGAGTTACTATTCAAGAATGGTTTCAAAGAGGCCTATGCAATCAAAGATGGAGTTAGAGGCCAGAAAGGGTGGATGGCTATACAGGATACCCTTTTGCCCCCTTCGGTGCATATGTCCCGAAGGAAAAAGACTAAAGCTTCACAAAAACTCAGTACAAATGGAAATGGAGCCATTCAGCAAAATGATAGTAATAATGAGAGTGCCTTATCCTCAGACATCCCTGCAGTTGGAAACCAAGAGACAGAAAATGGTCTTGTGAAAAGGTCTGAGTCTGATCTGGAAATGAAAAATGGTTCAGTAATTTCCTCTTCTCCCTATCCCAATTACCCAGATTTGAAGCCACCATCATCTCCAACACCATCAAAGCCACAATAG 1116 0.4301 MDSLSLLLSPYPLSNKNHPKTQKLSTSKPFSLLSNQNPPHSEIQFSASSPQPHFSSTKKIPASSLQTHCPNSLQNLQLLFRPQNLLTKSFLSLALFTPFPCLAVETAAPTLVESDAGKINLESILVSIDDFFNRYPFFVAGCTFIWLVVVPLAEEYFRKYKFVSAIDAFRKLRDDPDAQLLDIRDLKNVKFIWSPNLKMLEKETVQVEFTEGNEDGFVKKVLERFKDPPNTVVCVLDSFDGNSMKVAELLFKNGFKEAYAIKDGVRGQKGWMAIQDTLLPPSVHMSRRKKTKASQKLSTNGNGAIQQNDSNNESALSSDIPAVGNQETENGLVKRSESDLEMKNGSVISSSPYPNYPDLKPPSSPTPSKPQ* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00928 371 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 24 283 IPR044240 -
Rops8g00928 371 MobiDBLite consensus disorder prediction 355 371 - -
Rops8g00928 371 MobiDBLite consensus disorder prediction 282 371 - -
Rops8g00928 371 Gene3D - 159 284 IPR036873 -
Rops8g00928 371 MobiDBLite consensus disorder prediction 1 32 - -
Rops8g00928 371 ProSiteProfiles Rhodanese domain profile. 174 280 IPR001763 -
Rops8g00928 371 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 145 267 IPR036873 -
Rops8g00928 371 MobiDBLite consensus disorder prediction 295 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00928 Rops-Chr8 20143434 20151331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00928 122 272 Sulfurtransferasese or Rhodanese AT4G01050 40.909 1.88e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00928 - - gmx:100808729 432.18