Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00927 ATGCAAACCCTCTTGTTGTCCTTTTTCTTGTACTTGTTCTCAAGTGTACCTCAGCAACTAGCCTCAACCAAACCCTTTCACTCTCACACCAACAACAATAGAAGGATACTTCATGAACCCTTTGCACCATTAGACACTCTCCCTCCATCTCAACCACCGAAACCACCACCACCCCTTAAGCCCAAACACACATTTTCCACCAGCACCCCAACCACAACCACTACCACAACCACCAACAACGACCCAAACCAATCACCATTTTTCCCAAACTACCCTTTATCCCCTCCACCACCTTCCCCACTCACCTTTGCTTCATTCCCTGCTAACATTTCCTCTCTCATTCTCCCTCATTCCCCACAACCCGCTTCCTCTTCTAACAAACTCCTCCCTGTCGCCCTCTCCGCCACTGCATGCGCCGTTATCGCCGTCGCCATCTCCTCCTTTGTTTACTACCGCAGGCGCAGCCGGAACCATCGCTCCGCCGCCGAAAACAAGGCTCTAAGATCCGACAACAACCTCGGACCGTTCCCGCGCAATGTCGGAACCGCCACCGGAAGCCGCAGCTCCGAGTTTCTCTACATCGGCACCGTCGTGGACTCTCAAGGAATTGACGATGGTCCCCGCGGAGGCGGAGGTCCGGTGACTAGGAAAATGGATTCGCCGGAGCTCCGGCCGCTTCCTCCACTTGCACGGCTTCCAGAACCTCCGCCTCCTCCTCCGCCGTACGGTTACGCCGGTTCCACCACGGCGGAAGAAGAAGATGATGAGTTTTATTCACCGAGAGGGTCATCTTTGGGAGGCCGTGAGAGCTCCGGCGGAACAGAATCAGGTTCCCGGCGAATGTTCGCCGTCATTTCCGCAGAGAATTTCGCCGGAAGAAGCTGCATTTCGAGCTCCAGTTCGTGCTATTCATCTTCCTGTTCGCCGGAAAGGTTTAATTCTATCAACCTCTCGCCGCCGGCTAATTTTAGTCCTCGGAGAACACAACCAAAATCACCGGAAACCTCACCACCCCATAATGCAACACCAATTCACAACCAACACGTGCAATATTCTTCTTCTTGTTCTTCTTCTTCATTCTCTTCATCACGTTCAACACCAGAGAGAGCTTTTGGTGAAGATGATAATACTCACTCTCCTTCACTTTCTCCACTTTCCATCTCACCCAACAGAGATTCGGTGAAAAACCCAAATGGGGTATTGAGTTCATGCACAAATGCACATGCATCATCATCATCATCAAAAGAGAGAATTTTGGAGAAAAATGAAGAAGATGCACCATCACCACCACAACCACCAAGGCTATCTAATGCTTCTTCCAATGGAAGTAGTAGAAATTCTATATCTTCATCTTCAGCTTTTTCATTACCCTCTTCGCCTGAGAAGGTGATGCATTATCGTCAGAGTTTTGATCAGTCTCCGAGAATATCTAGTGCCTCTGACAGGTTAAAGTTACCGGGTCTGTCATCACTTCCTCTGTCACCCTCCCTGCTTTCATCACCAGAACCAGAAAGAGGGTTTCTTGGCACTTCAACAGTTGATAATGCTGTGCCTGTGCCTCAGAGGAAACATTGGAACATTCCAGTACTTTCTACAACAACAACCTTTGGTCAATCAGCAACTGTTGACAATATTTTTGATCATCAAATTGCAGCATTTCCATCTTCTCCAATTGTGCCACAGAGGAAACAATGGGAGATTCCTCTTCAATCAACCCCTATTGCTCCATCACCTCCACCGCCGCCACCTCCACCACCGCAGCTGCAGCGGAAACATTGGGAAATGCCGGCTCCCTCATCACTTGTTGGTCAACCTATTTCGAGGCCGCCGGAGTTGGTACCTCCTTCAAGGTCTTTTGTGTTCCAAAACACATCCAATGTTTCACCTGTTGTGTTGCCCCAGAGTTTGGGGGAAATTGAAGAGACCTTGAAACCCAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGAACTAGCTCTGATCGTAAAATGGTGTGGGATCAGTTGAAGTCAAGCTCATTTAAATTGAATGAGGAAATGATTGAAACATTGTTTGTAGTGAACGCACCAAACCAAAAGCATAAGGATGCCACTCTACACTCTGTGCTCCCCCCAACAAATCAGGAGGACAGAGTACTTGATCCTAAAAAGTCTCAAAATATTGCAATCTTGCTCAAAGCTCTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGTAGTACTGATACACTTGGAACAGAACTACTCGAAAGCTTGTTAAAAATGGCACCAACCAAGGAAGAAGAACGTAAATTGAAGGAATATAAAGATGACTCGCCAACTAAGCTTGATCTGGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTTGAAGCAATGCTTTACATGGTCAATTTTGATTATGAAGTGGAGTATCTTAGAAAATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGCTGCGAAATTGTAGGATGTTCTTGAAACTTCTAGAGGCTGTACTTAAAACTGGAAACCGCATGAATGTTGGGACAAACCGTGGTGATGCAGAGGCCTTCAAACTTGATACACTTCTCAAGCTGGCTGATGTCAAAGGTGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTGCAGGAAATTATTAGAACTGAAGGTTCTCGACTCTCTGGCACTAATCAAACTCCAAACTCTACTTTGATTGAAGATGGCAAGTGTAGAAGGCTTGGCTTACAAGTAGTATCTAGTCTAAGTTCAGAACTAGCAAATGTGAAGAAGGCTGCTACTATGGATTCTGAAGTTCTCAGCAGTGATGTCTTAAAACTTTCCAAAGGAATTGCAAACATAGGAGAGGTTATGCAATTAAACCAAACGGCTGGATCAGATGAAAGCAATAAGAAATTTACAGAATCAATGAACAAATTCATTAGAATGGCTGAGGAGGAAATTCTTAAAATTCAAGCCCAAGAAAGTGTTGCTTTGACCCTTGTGAAGGAGATTACCGAGTACTTTCATGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTTGTAAGAGACTTCTTAGCAGTTCTTGACAGGGTTTGCAAGGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCAGCTCATAAATTTCCTGTTCCAGTTAATCCAATGCTTCCACAACCCCTTACTGGATTACATGAAAGGCAACAGTGTAGCAACTCTTCAGATGATGATAGTTCATCACCTTAG 3273 0.4546 MQTLLLSFFLYLFSSVPQQLASTKPFHSHTNNNRRILHEPFAPLDTLPPSQPPKPPPPLKPKHTFSTSTPTTTTTTTTNNDPNQSPFFPNYPLSPPPPSPLTFASFPANISSLILPHSPQPASSSNKLLPVALSATACAVIAVAISSFVYYRRRSRNHRSAAENKALRSDNNLGPFPRNVGTATGSRSSEFLYIGTVVDSQGIDDGPRGGGGPVTRKMDSPELRPLPPLARLPEPPPPPPPYGYAGSTTAEEEDDEFYSPRGSSLGGRESSGGTESGSRRMFAVISAENFAGRSCISSSSSCYSSSCSPERFNSINLSPPANFSPRRTQPKSPETSPPHNATPIHNQHVQYSSSCSSSSFSSSRSTPERAFGEDDNTHSPSLSPLSISPNRDSVKNPNGVLSSCTNAHASSSSSKERILEKNEEDAPSPPQPPRLSNASSNGSSRNSISSSSAFSLPSSPEKVMHYRQSFDQSPRISSASDRLKLPGLSSLPLSPSLLSSPEPERGFLGTSTVDNAVPVPQRKHWNIPVLSTTTTFGQSATVDNIFDHQIAAFPSSPIVPQRKQWEIPLQSTPIAPSPPPPPPPPPQLQRKHWEMPAPSSLVGQPISRPPELVPPSRSFVFQNTSNVSPVVLPQSLGEIEETLKPKLKPLHWDKVRTSSDRKMVWDQLKSSSFKLNEEMIETLFVVNAPNQKHKDATLHSVLPPTNQEDRVLDPKKSQNIAILLKALNVTIEEVCEALLEGSTDTLGTELLESLLKMAPTKEEERKLKEYKDDSPTKLDLAEKFLKAVLDVPFAFKRVEAMLYMVNFDYEVEYLRKSFQTLEAACEELRNCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGSRLSGTNQTPNSTLIEDGKCRRLGLQVVSSLSSELANVKKAATMDSEVLSSDVLKLSKGIANIGEVMQLNQTAGSDESNKKFTESMNKFIRMAEEEILKIQAQESVALTLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLTGLHERQQCSNSSDDDSSSP* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00927 1090 MobiDBLite consensus disorder prediction 308 367 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 64 87 - -
Rops8g00927 1090 Pfam Formin Homology 2 Domain 642 1036 IPR015425 -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 572 591 - -
Rops8g00927 1090 Gene3D Formin, FH2 domain 639 1045 IPR042201 -
Rops8g00927 1090 SUPERFAMILY Formin homology 2 domain (FH2 domain) 576 1048 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 45 63 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 202 278 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 308 482 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 435 458 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 1073 1090 - -
Rops8g00927 1090 SMART it6_source 637 1051 IPR015425 -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 161 182 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 1069 1090 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 41 93 - -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 226 244 - -
Rops8g00927 1090 PANTHER FORMIN-RELATED 378 1082 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Rops8g00927 1090 MobiDBLite consensus disorder prediction 570 592 - -
Rops8g00927 1090 ProSiteProfiles Formin homology-2 (FH2) domain profile. 637 1062 IPR015425 -
Rops8g00927 1090 MobiDBLite consensus disorder prediction 376 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00927 Rops-Chr8 20125240 20130627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00927 593 1078 FH2 protein (formin) Gene Family AT3G25500 72.379 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00927 - - gmx:100806759 1093.18