Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00915 ATGTTATCAGAGTTGATGAACTATTTGACAGCCTGCTTTAGGCCGCGTTTGGATCGATATGCACGCAGTGGTTCAGATGCTGGAGGTAAACAGGATGGACTCTTGTGGTACAAAGACTCGGGGCGGTACTTGAATGGTGAATTCTCAATGGCTGTGGTCCAAGCCAACAACTTGTTGGAGGATCAGAGCTATATTGAATCAGGCAGTTTGGGCTCCAGTGATTCTGGGCCTTATGGCACCTTTGTTGGTGTCTATGATGGGCATGGAGGACCTGAGACGTCACGGTTTATCAATGATCACCTTGTTCACCATCTCAAGAGATTTACTGCAGAGCAACAATCAATGTCAGTGGATGTGATTCGCAAGTCAATCCAAGCAACAGAAGAGGGATTTATGTCACTTGTTGCCAGACAGTGGTCAATGAAACCACAAATTGCAGCTGTTGGATCGTGCTGTCTTATTGGTGTAATTTGTAATGGAACCCTTTATATAGCAAATCTTGGTGATTCCCGGGCTGTTTTGGGAAGAGCAGTCAAGGCAACCGGGGAGGTTTTGGCGGTGCAATTGTCAACTGAACATAATGCAGCAATAGAGTCTGTAAGACATGAGCTGCAATCTTTGCACCCTGATGATAAAAATATTGTTGTCTTGAAGCATAATGTATGGCGTGTGAAGGGCCTAATACAAGTTTCTAGATCTATTGGTGATGTATATCTGAAAAAGGCTGAGTTCAATAGGGAACCACTATATGCAAAGTTTCGACTTCGTGAGCCTTTCAAGAGGCCAATATTGAGCTCAGAACCATCAATATCAGTGCACCAGTTGCAGCCCCATGATCAGTTTATTATATTTGCATCTGATGGGCTCTGGGAGCACCTTAGCAATCAAGATGCAGTTGATATAGTTCAAAATAATCCCCACTCTGGAATTGCAAGGAGGTTGGTGAAAACTGCCCTTCAAGAAGCAGCAAAGAAGAGAGAAATGAGATATTCAGATCTTAAAAAAATTGACCGCGGCGTTCGTCGGCATTTCCACGATGATATCACAGTGATTGTTGTGTTTATTGACTCAAATCTCGTGAGTAGAGCAAGCTCTGTCAAGTTCAATAGTATTTCTGTTCGAGGGGGTGGTATCAATCTGCCTCATAACACATTGGCACCTTGTACTACACCAACAGAAGCTGGTGCTACCTGA 1194 0.438 MLSELMNYLTACFRPRLDRYARSGSDAGGKQDGLLWYKDSGRYLNGEFSMAVVQANNLLEDQSYIESGSLGSSDSGPYGTFVGVYDGHGGPETSRFINDHLVHHLKRFTAEQQSMSVDVIRKSIQATEEGFMSLVARQWSMKPQIAAVGSCCLIGVICNGTLYIANLGDSRAVLGRAVKATGEVLAVQLSTEHNAAIESVRHELQSLHPDDKNIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYAKFRLREPFKRPILSSEPSISVHQLQPHDQFIIFASDGLWEHLSNQDAVDIVQNNPHSGIARRLVKTALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFIDSNLVSRASSVKFNSISVRGGGINLPHNTLAPCTTPTEAGAT* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00915 397 CDD PP2Cc 48 355 IPR001932 -
Rops8g00915 397 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Rops8g00915 397 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Rops8g00915 397 PANTHER PROTEIN PHOSPHATASE 35 353 IPR015655 GO:0004722|GO:0006470
Rops8g00915 397 FunFam Phosphatase 2C family protein 36 365 - -
Rops8g00915 397 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Rops8g00915 397 ProSiteProfiles PPM-type phosphatase domain profile. 47 355 IPR001932 -
Rops8g00915 397 SMART PP2C_4 39 353 IPR001932 -
Rops8g00915 397 Gene3D - 38 365 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00915 Rops-Chr8 19965477 19970287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00915 1 396 PP2C-type Phosphatase Gene Family AT4G38520 75.505 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00915 - K01102 jre:109006616 696.427