Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00881 ATGATAAGGGTTGTGCACATGAAGCACCGATGGTTATTCTTTGCTGAAGTGCAACACCATTTGTTGGCTGTTCACGAACAGCACCACCCATGCGCCAAGGGAGTTATTGAAGAGAAGAGAGGGGGACCAAGGATATATGATCCAGATGGGAACTTGAGGTGGGTTGAGGTGGTGCAACTTGGGGCTCGAAAATGCTGTTTTTTTCACTGCAACAACCTCCTACCCCTTCTACCACTCTTTCTACGAGTGCTATCCGAAGGAATTGGAGTCACATCCTCTATGCGACCAGCTTTCACTCCTGACCGAGCCAAGGCACGGAGAGCAGAACTGAGCACTAGGGCCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGAGTTGACTTTTGGAGGTCGTTATGTTATTCTGTTGATGGCACTCTTCTCAATCTACACTGGTGTGATCTATAATGAGTTCTTTTCTGTTCCATTTGAACTCTTCGGTCCCTCTGCATATGAATGTCGTGACCTTTCTTGCAGTGAAGCTACAACAGTGGGCCTAATAAAAGTGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAATTGCCATTCCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTGGGAATTATAATGAGCTATTGCAATGCCAAATTCTTTAGGAACAACGTAAATGTATGGTTCCAATTTATTCCCCAGCTGATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTGTTGTGAAGTGGTGTACTGGTTCTCAAGCTGATTTGTACCATACAATGATCTACATGTTCCTGAGCCCAACAGATGAGTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAAAATCTACAGCTTGTGCTTTTGCTTCTGGCTGTTGTCGCTGTGCCCTGGATGCTGTTGCCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCCTATGCACCACTTCAAAACACATATGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCACGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACAATCGAATTTGTACTTGGAGCAATATCTAATACTGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCACTCAGAGTTGTCAAGTGTATTCTACGAGAAGGTTCTGATAATGGCATCAGTTATGGTGCATATGGAAGTTATGGTAGTGCCACTGCTGGGAATTGGAATCACATCCTCTATGCGACCAGCTTTCACTCCTGACCGAGCCAAGGCACGGAGAGCAGAACTGAGCACCAGGGCCAGGGAGAAGAAACTTTCTAGCCAGAAGCTTGATGACATCACAGAGATGACTTTTGGAGGTCGTTATGTTATTCTGTTGATGGCACTCTTCTCAATCTACACTGGTGTGATCTATAATGAGTTCTTTTCTGTTCCATTTGAACTCTTCGGTCCCTCTGCATATGAATGCCGTGACCTTTCTTGCAGTGAAGCTACAACGGTGGGCCTAATAAAAGTGCGTCGCACTTACCCTTTTGGAGTGGATCCTGTATGGCATGGTACACGAAGTGAATTGCCATTCCTGAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGAGTTGCTCAAATGAACCTGGGAATTATAATGAGCTATTGCAATGCCAAATTCTTTAGGAACAACGTAAATGTATGGTTCCAATTTATTCCCCAGCTGATATTTCTCAACAGTCTATTTGGCTACCTATCCCTTCTTATTGTTGTGAAGTGGTGTACTGGTTCTCAAGCTGATTTGTACCATACAATGATCTACATGTTCCTGAGCCCAACAGATGAGTTGGGTGAGAACCAACTCTTTGTTGGTCAGAAAAATCTACAGCTTGTGCTTTTGCTTCTGGCTGTTGTCGCTGTGCCCTGGATGCTGTTGCCAAAACCTTTTATTTTGAAGAAGCAACATGAAGCTAGGCACGGGGATGAATCCTATGCACCACTTCAAAACACATATGAGAGCTTGCAAGTGGAGTCAAATCATGATTCCCACGGTCATGAGGAATTTGAGTTCAGTGAAGTCTTTGTACATCAACTCATACACACAATCGAATTTGTACTTGGAGCAATATCTAATACTGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCACTCAGAGTTGTCAAGTGTATTCTACGAGAAGGTTCTGATAATGGCATCAGTTATGGTGCATATGGAAGTTATGGTAGTGCCACTGCTGGCAAGGGATAGACGGGACTTATGTTTGGATAAAAGAGTCCCCAGTTCTGCTCCACTCCACTTTGCTTCTGGTTCTCATTGA 2409 0.4375 MIRVVHMKHRWLFFAEVQHHLLAVHEQHHPCAKGVIEEKRGGPRIYDPDGNLRWVEVVQLGARKCCFFHCNNLLPLLPLFLRVLSEGIGVTSSMRPAFTPDRAKARRAELSTRAREKKLSSQKLDDITELTFGGRYVILLMALFSIYTGVIYNEFFSVPFELFGPSAYECRDLSCSEATTVGLIKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNAKFFRNNVNVWFQFIPQLIFLNSLFGYLSLLIVVKWCTGSQADLYHTMIYMFLSPTDELGENQLFVGQKNLQLVLLLLAVVAVPWMLLPKPFILKKQHEARHGDESYAPLQNTYESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAISNTASYLRLWALSLAHSELSSVFYEKVLIMASVMVHMEVMVVPLLGIGITSSMRPAFTPDRAKARRAELSTRAREKKLSSQKLDDITEMTFGGRYVILLMALFSIYTGVIYNEFFSVPFELFGPSAYECRDLSCSEATTVGLIKVRRTYPFGVDPVWHGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSYCNAKFFRNNVNVWFQFIPQLIFLNSLFGYLSLLIVVKWCTGSQADLYHTMIYMFLSPTDELGENQLFVGQKNLQLVLLLLAVVAVPWMLLPKPFILKKQHEARHGDESYAPLQNTYESLQVESNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAISNTASYLRLWALSLAHSELSSVFYEKVLIMASVMVHMEVMVVPLLARDRRDLCLDKRVPSSAPLHFASGSH* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00881 802 PANTHER VACUOLAR PROTON ATPASES 459 769 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops8g00881 802 Pfam V-type ATPase 116kDa subunit family 460 765 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops8g00881 802 Pfam V-type ATPase 116kDa subunit family 115 420 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00881 Rops-Chr8 19432442 19452357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00881 460 762 Primary Pumps ATPases(2) AT2G21410 81.518 7.04e-177 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00881 K02154 - gmx:100783125 530.791