Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00880 ATGCAGACAAACTACAGGAACCCAATGAGCCAAAGCTCATTGAAGCAGGCAAATGGAGTGGTTCTAAAAGACAGTAGAGTGGGAGATAGCAAAAACTGTGGTGCTACATGGGCATTTGAAGTGGAATACCAGACAATGGTATGCCCAATTATAGTTGAGGACATGAGCACACCTGGCCAAATGCTTATAGAGATGCTTTGTGATGAGCAGGGTTTCTTCCTTGAGATAGTTGACATAATTCGGGGTTTGGGGCTGAATATCTTGAAAGCAAAGATGGAACTAAGGAAGAACAAACTATGGTCACGCTTTATTGTTGAGGTATTGGAGGTGTGTGTTTGGCTCTTTCCATATGACTTACCGTCAAATATGCGAGTCTCGAGGTCAGAACTATGTAATCCTAAGGCACCTGCATCACCACTTAGTTATGTCGAGACTGAGCACATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACTGGTGATTTATACATTGCGGATGCGTATTTTGGGGTGATGAAGGTGGGTCCTCGGGGTGGTTTAGCAACATCTCTTCCAACGAGAGGTGAAGGGGTGCCACCGAGATTTACTAATGATGTAGACATTGATACAGAGGGGAACGTTTATTTTACTGATAGCAGCACTTACTATCAGAGGAAGTAA 666 0.4384 MQTNYRNPMSQSSLKQANGVVLKDSRVGDSKNCGATWAFEVEYQTMVCPIIVEDMSTPGQMLIEMLCDEQGFFLEIVDIIRGLGLNILKAKMELRKNKLWSRFIVEVLEVCVWLFPYDLPSNMRVSRSELCNPKAPASPLSYVETEHICGRPLGLRFDKKTGDLYIADAYFGVMKVGPRGGLATSLPTRGEGVPPRFTNDVDIDTEGNVYFTDSSTYYQRK* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00880 221 Gene3D - 120 221 IPR011042 -
Rops8g00880 221 SUPERFAMILY Calcium-dependent phosphotriesterase 143 215 - -
Rops8g00880 221 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 13 107 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00880 Rops-Chr8 19398851 19400834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00880 24 107 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.571 6.31e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00880 - - mtr:11418029 170.244