Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00876 ATGTCCTTACCTGCACAGAACCGACTAGGATTTCAGCATGCGAAGAAACTAAAACAGCATCATTCTGCAAAGTTGCTTCCACCAGCTCTTCATGTGGTTTACTCACGGCTGCAAGCAAGCAAGCATGGATGCCATGCGGAAGCAGCCATGGCCACCGCTCAAGCTGCTGTGGAGGCTACAAGGTTGGGAAAACCTTCAAGTCATGCTAGGGAGCAGTATGCTGCTATTGTAACCCAAACTTCTTTCAGAGGGTATCTGGCAAGAAGAGCACTTCGTGCACTTAAAGGAGTACAAGCAAGGGTCCTTGACCAACGCATAAGGTCTTCACATGATGAAAGTAGAAAATCCACCTTCGAAGACTCCTTGAAGGAGAGTGAATATGGTTACGTTCGCAAGGCATCTGGACCAGTCGTGGTTGCAGATGGCATGAATGGGGCTGCTATAATGAACTGGTCCGTCGGGTCGACAAGCACAAAGGCTACAGAGACCTCAGCAAACGCAGGGTCCATGAAGAGTGTTACCACAAGGGCAAGCTCGTTAACTCCATCATGCGCCACGTGGCAGAGACAACTTATCTTTGGTGCCACAGAGTATACTACTTCAATTGATATTTGGTCTGCTGGTTGTGTCCTTGCCGAACTGCTTTTGGGCCAACCATTATTCCCTGGTGAAAATGCAGTGTACCAGCTTGTACATATTGTAAAGGTGCTAGGAACACCCACTCGGGAGGAAGTACGCTGTATGAATCCCAATTATAATGACTTTAGGTTTCCACAAATTAAAGCACACCCATGGCACAAGATCTTCCACAAAAAGATGCCTCCAGAAGACATTGATCTTGCTTCCCGGCTTTTGCAATACTCCCCAAGTCTCCGGTACACTGCACTTGAAGCGTGTGTACATCCTTTCTTTGATGAACTCCGAGTACCCGATGCTCACCTGCCAAATGGTCGTCCATTTCCCCCTCTATTCAACCTCAAACAGGAATTATCTGGGGCTGTCTCCAGAGCTTGTTAA 1017 0.4779 MSLPAQNRLGFQHAKKLKQHHSAKLLPPALHVVYSRLQASKHGCHAEAAMATAQAAVEATRLGKPSSHAREQYAAIVTQTSFRGYLARRALRALKGVQARVLDQRIRSSHDESRKSTFEDSLKESEYGYVRKASGPVVVADGMNGAAIMNWSVGSTSTKATETSANAGSMKSVTTRASSLTPSCATWQRQLIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVYQLVHIVKVLGTPTREEVRCMNPNYNDFRFPQIKAHPWHKIFHKKMPPEDIDLASRLLQYSPSLRYTALEACVHPFFDELRVPDAHLPNGRPFPPLFNLKQELSGAVSRAC* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00876 338 Pfam Protein kinase domain 194 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00876 338 ProSiteProfiles Protein kinase domain profile. 1 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00876 338 SUPERFAMILY Protein kinase-like (PK-like) 191 310 IPR011009 -
Rops8g00876 338 SMART serkin_6 116 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00876 338 Gene3D Transferase(Phosphotransferase) domain 1 156 336 - -
Rops8g00876 338 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 189 332 - -
Rops8g00876 338 ProSiteProfiles IQ motif profile. 71 100 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00876 Rops-Chr8 19334354 19340256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00876 165 307 Core Cell Cycle Gene Families AT2G38620 34.810 1.25e-23 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops8g00876 Pkinase 3.4e-14 CL0016