Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00873 ATGGGTCGCTCCATTTTATACCTTCACTTTCTGGTTTCATCTTTTCTTATTTTCACTTTGTCGCTGAATGGTGTTCATGCCAACAAAAAGTGCTACATTGTATACTTGGGAGGACATTCTCATGGTCCAACCCCTTCCTTTGTTGACCTTGAAACTGCCACATCTTCTCATTATGATTTTCTGGGTTCAATCTTGGGAAGTCATGAGAAGGCCAAAGAAGCAATCATTTATTCATATAATAGACACATCAATGGCTTTGCAGCTGTACTTGAAGAGGAAGAAGCTGCAGATATTGCAAAAAACCCAAATGTAATATCTGTGTTCTTGACCAAAGAGCATAAACTGCACACTACCCGTTCATGGGAATTTCTTGGACTGCGAGGAAATGGCATGAACACAGCATGGCAAAAGGGTAGATTTGGTGAAAATACAATCATTGCCAACATTGACACAGGTGTTTGGCCTGAATCGAAGAGTTTTAGTGACAAAGGGATAGGCCCTGTCCCAGCAAAATGGCGTGGTGGTAATATCTGTCAAATTAACATACTCCGAGGTTCAAAGAAAGTTCCATGTAACAGGAAGCTAATTGGAGCAAGATTCTTCAACAAAGCTTACGAGGCATATAATGGCAAACTTCCCCCCTCACTGCAAACCGCACGTGACTTTGTGGGCCATGGTACTCATACTCTATCAACAGCTGGGGGCAACTTTGTACCAGGTGCAAGTGTATTTGCTGTTGGTAATGGTACTGCAAAGGGTGGGTCCCCAAGAGCCAGAGTTGCAACCTACAAAGTGTGTTGGTCTCTAACCGATGCAGCCAGCTGCTATGGTGCTGATGTGCTGGCTGCTATTGGAACTGTTGTGAATGTGGCTCCTTGGGGTGCCAGTCTTTTTGTAAACTTACCACCTAACAAGTCCTTTTCTTTGATCCTTTCTACTGATGCTAAACTTGCCAATGCGACACGTCGAGATGCTCGACTTTGTAGACCCGGGACAATTGATCCTACAAAAGTAAAGGGCAAAATGGTCGTCTTACAACTACCACGTAATTAA 1053 0.4349 MGRSILYLHFLVSSFLIFTLSLNGVHANKKCYIVYLGGHSHGPTPSFVDLETATSSHYDFLGSILGSHEKAKEAIIYSYNRHINGFAAVLEEEEAADIAKNPNVISVFLTKEHKLHTTRSWEFLGLRGNGMNTAWQKGRFGENTIIANIDTGVWPESKSFSDKGIGPVPAKWRGGNICQINILRGSKKVPCNRKLIGARFFNKAYEAYNGKLPPSLQTARDFVGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVATYKVCWSLTDAASCYGADVLAAIGTVVNVAPWGASLFVNLPPNKSFSLILSTDAKLANATRRDARLCRPGTIDPTKVKGKMVVLQLPRN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00873 350 SUPERFAMILY Subtilisin-like 11 296 IPR036852 GO:0004252|GO:0006508
Rops8g00873 350 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 116 IPR037045 -
Rops8g00873 350 FunFam Subtilisin-like protease SBT5.3 21 116 - -
Rops8g00873 350 Gene3D - 290 350 - -
Rops8g00873 350 Gene3D Peptidase S8/S53 domain 144 287 IPR036852 GO:0004252|GO:0006508
Rops8g00873 350 Pfam Subtilase family 141 284 IPR000209 GO:0006508|GO:0008236
Rops8g00873 350 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 285 IPR045051 -
Rops8g00873 350 Pfam Peptidase inhibitor I9 32 115 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00873 Rops-Chr8 19145756 19149950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00873 19 344 Subtilisin-like Serine Gene Family AT5G59810 48.900 1.62e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00873 - - gmx:100803751 525.013