Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00868 ATGGTTTACAAGTTCTTGGAAGGAGGCAACTTGGACCAAATACAATACAATGATACACAAGCAGTTGCATTTGATTGGGAGAAAAAGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTGTCCTATTTGCATCGTGAATTCTCACCTCTTATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTCTTGATCTTGAATATGAAGCTCATGTCTCTGATTTTGGGACGGTTAAGTTTTTGAAGCGTGGTTCACACAGGATCAAATCATCTGTGCCAGAATTGGACTTTTCCGAAAGCGAGAATTAG 306 0.3922 MVYKFLEGGNLDQIQYNDTQAVAFDWEKKVNVVKGVANALSYLHREFSPLIVHRDISSKNVLLDLEYEAHVSDFGTVKFLKRGSHRIKSSVPELDFSESEN* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00868 101 ProSitePatterns Tyrosine protein kinases specific active-site signature. 51 63 IPR008266 GO:0004672|GO:0006468
Rops8g00868 101 PANTHER LEUCINE RICH REPEAT KINASE 2 2 84 - -
Rops8g00868 101 Pfam Protein kinase domain 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00868 101 SUPERFAMILY Protein kinase-like (PK-like) 1 85 IPR011009 -
Rops8g00868 101 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Rops8g00868 101 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00868 Rops-Chr8 18947633 18948038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00868 1 84 Receptor kinase-like Gene Family AT4G08850 57.143 9.11e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g00868 Pkinase 7.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00868 - - lja:Lj0g3v0284579.1 139.813