Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00845 ATGGTACTGATTGATGTTCATATGTCAGACATGGATGGCTACAAACTCCTTGAACATGTTGGGTTGGAAAGGGACCTTCCTGTTGTTATGATGTCTGCTGATGGTACAACAAAAGCTGTCGTGAAGGGAATTAGACAAGGGGCTTGCGATTATTTGATTAAGCCTGTACGTGAGGAGGAACTAAGGAATATATGGCAGCGTTTTGTTGAAGCAGAGACGTTTCCTGAAGCTACATGGCTCACACGCACAAGCTCCATGGCTTCTCCATTCCCGGTGTTGAATATTTGGATATGTCGAATTCACCAACCTGTGCTCGCTCTTGCGGGGCATGGTTGTGTTCTTCAAGCAGTGAAGAACGACCAACACATGATGCAGCAACAACTGTGGGTTGTCCACGATGGAGATAATGGCCCCAAAAGGGAAAGAGAATACAAAATGGTGATCAAGTTTGTTGCACGTGCAAACTTGTATCACTTGGGGCAGTTCCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCGCTCCAAATTTTTGGCACCGTATCAAGAGAGCTATCATCTAAGAGGTTTTTGCCCTGTAGGGAGGTCTTTCTTTTCACCTGA 603 0.4627 MVLIDVHMSDMDGYKLLEHVGLERDLPVVMMSADGTTKAVVKGIRQGACDYLIKPVREEELRNIWQRFVEAETFPEATWLTRTSSMASPFPVLNIWICRIHQPVLALAGHGCVLQAVKNDQHMMQQQLWVVHDGDNGPKREREYKMVIKFVARANLYHLGQFLAGKRADAPQEALQIFGTVSRELSSKRFLPCREVFLFT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00845 200 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 86 IPR045279 GO:0009736
Rops8g00845 200 ProSiteProfiles Response regulatory domain profile. 1 69 IPR001789 GO:0000160
Rops8g00845 200 Pfam Response regulator receiver domain 1 64 IPR001789 GO:0000160
Rops8g00845 200 SUPERFAMILY CheY-like 1 72 IPR011006 -
Rops8g00845 200 Gene3D - 1 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00845 Rops-Chr8 18243738 18244484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00845 1 69 Response Regulator Gene Family AT3G16857 68.116 1.11e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g00845 Response_reg 2.1e-12 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00845 - K14491 gmx:100804937 120.168