Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00844 ATGTCAGACATGGATGGCTACAAACTCCTTGAACATGTTGGGTTGGAAAGGGACCTTCCTGTTGTTATGATGTCTGCTGATGGTACAACAAAAGCTGTCGTGAAGGGAATTAGACAAGGGGCTTGCGATTATTTGATTAAGCCTGTACGTGAGGAGGAACTAAGGAATATATGGCAGCGTTTTGTTGAAGCAGAGACGTTTCCTGAAGCTACATGGCTCACACGCACAAGCTCCATGGCTTCTCCATTCCCGGTGTTGAATATTTGGATATGTCGAATTCACCAACCTGTGCTCGCTCTTGCGGGGCATGGTTGTGTTCTTCAAGCAGTGAAGAACGACCAACACATGATGCAGCAACAACTGTGGGTTGTCCACGATGGAGATAATGGCCCCAAAAGGGAAAGAGAATACAAAATGGTGATCAAGTTTGTTGCACGTGCAAACTTGTATCACTTGGGGCAGTTCCTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCGCTCCAAATTTTTGGCACCGTATCAAGAGAGCTATCATCTAAGAGGTTTTTGCCCTAGGAACCAACTGAAGAAGCTGAAGAAAAACCAGCTGAGGTACTTGCAGTAAAATCTGCTGAGGTACCAACTAAACAACCAGCTGAGGTACCTGCTGAAGGAGCTGCTGAAGTGGAAGCTGCTGCTGAAATCCTTGAAGAAATGACCTCTCAAGGCCCTAAGGTTGTTAAGACAGCTGAAGAAGCACCTACTCAACCTGAGGAGGTTATTTTTGAAGAGCAAACTGTAAATATGGAGTTTCCAAAGGTATTGCCTGAGGTACCAACTGAGCTCTTAGCTCAGTCACAAGTAAAAGCACCTGAGGTGCAAGTTCCTGAGGTCTCTCAGAAAGTTGAGGCAGAACCCAACTTTAATTTCTCTGCATTTGGAGATCAATTCTGA 936 0.4583 MSDMDGYKLLEHVGLERDLPVVMMSADGTTKAVVKGIRQGACDYLIKPVREEELRNIWQRFVEAETFPEATWLTRTSSMASPFPVLNIWICRIHQPVLALAGHGCVLQAVKNDQHMMQQQLWVVHDGDNGPKREREYKMVIKFVARANLYHLGQFLAGKRADAPQEALQIFGTVSRELSSKRFLP*EPTEEAEEKPAEVLAVKSAEVPTKQPAEVPAEGAAEVEAAAEILEEMTSQGPKVVKTAEEAPTQPEEVIFEEQTVNMEFPKVLPEVPTELLAQSQVKAPEVQVPEVSQKVEAEPNFNFSAFGDQF* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00844 310 Pfam Response regulator receiver domain 1 57 IPR001789 GO:0000160
Rops8g00844 310 ProSiteProfiles Response regulatory domain profile. 1 62 IPR001789 GO:0000160
Rops8g00844 310 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 111 IPR045279 GO:0009736
Rops8g00844 310 Gene3D - 1 270 - -
Rops8g00844 310 SUPERFAMILY CheY-like 1 65 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00844 Rops-Chr8 18223671 18231432 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00844 1 62 Response Regulator Gene Family AT3G16857 69.355 4.17e-23 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g00844 Response_reg 9.8e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00844 - K14491 pcin:129311779 112.079