Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00829 ATGTCTATTAGAAAACCCCCATTCCCTCGTCTCCTCCTTAACAATGTCTCTTGCATGAGAAATGCCCAGCAAGTTCTGCGTCACGTGAATGTCTCTCTCCATGATGGAGGGGCACTTGTGCTAGCAGGTGCAAATGGCTCAGGAAAGACAACTTTCTTGCGCATGTTAGCTGGGTTTTCTCGTCCTTCTGCTGGTGAAATCCTTTGGAATGGCCATAACATTCAAGAATCCGGAATCTTCCATCAGTATAAGCTCCAGCTTAACTGGCTCTCCCTCAAGGATGCCATTACAGAGAAGTTTACGGTTTTTCAAAATGTTCAATGGTTTGAACTTCTTGAAGGCAAGCAAGGGAAAGCCATGCCTGCACTTGAGTTGATGGGGCTAGGAAGATTGGCCAAGGAAAAGCCAAGGATGTTGTCTATGGGACAGCGGAAAAGACTGCAACTTGCCAGATTGTTGGCAATTGATCGCCCCATATGGTTGTTAGATGAGCCTTCAGTTGCATTAGATGATGAAGGTGTAAAGTTACTTGAGTATATTATTGCAGAACATAGGAAACAGGGAGGGATTGTGATTGTGGCAACTCATTTACCCATTGAGATTGAAGATTCCATGGTCTTGAGGCTGCCACCAAGGTTTCCAAGGAGGATGACTTTTGTGGATATGCTTGACCGGGCGGATATTAGTTAA 690 0.4507 MSIRKPPFPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALVLAGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQESGIFHQYKLQLNWLSLKDAITEKFTVFQNVQWFELLEGKQGKAMPALELMGLGRLAKEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDDEGVKLLEYIIAEHRKQGGIVIVATHLPIEIEDSMVLRLPPRFPRRMTFVDMLDRADIS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00829 229 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 223 IPR005895 GO:0017004|GO:0022857
Rops8g00829 229 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 11 229 IPR003439 GO:0005524
Rops8g00829 229 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 201 IPR027417 -
Rops8g00829 229 NCBIfam heme ABC exporter ATP-binding protein CcmA 13 209 IPR005895 GO:0017004|GO:0022857
Rops8g00829 229 Gene3D - 8 208 IPR027417 -
Rops8g00829 229 SMART AAA_5 35 223 IPR003593 GO:0016887
Rops8g00829 229 Pfam ABC transporter 26 166 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00829 Rops-Chr8 17748199 17748888 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00829 24 178 Calmodulin-binding Proteins AT2G36910 25.146 1.26e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00829 - - cpap:110815669 407.527