Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00827 ATGAGAGAAGATGGTCACATAATGCTATCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTTTTGTGAAGTCATCAAACTCTAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAACCAACTTGTGCACAGGGTCTCACGAGGAAGGTCAACCACAGTGGGAGGTTAAATTACAAGCAACAAACTAACCGTTTTTCGGTTAAAGCCTCTGCTAAAGAGATAGCCTTTGACCAGAACTCACGCGCCGCCCTTCAAGCCGGCATTGACAAACTCACCGATGCCGTTGGCCTCACTCTCGGTCCAAGGGGGAGGAATGTTGTGTTGGATGAGTTCGGGAGTCCTAAGGTTGTTAATGATGGTGTTACAATTGCAAGAGCTATTGAACTTCCTGATGCTATGGAAAATGCTGGTGCAGCTCTTATTAGAGAGGTTGCGAGTAAAACCAATGACTCTGCTGGTGATGGGACTACGACGGCTTCGGTTCTTGCACGAGAAATCATTAAGCTTGGACTTCTGAGTGTTACTTCTGGTGCTAATCCTGTGTCCCTTAAAAGAGGGATTGATAAAACTGTACTGGGTTTGGTGGAGGAGCTTGAGAAGAAAGCTAGGGCTGTCAAAGGTGGAGATGATATCAAAGCTGTTGCTACTATTTCTGCTGGAAATGATGAGTTGATTGGAAAAATGATCGCGGAAGCAATTGACAAGGTTGGACCTGATGGTGTTTTATCCATTGAGTCTTCGTCTTCATTTGAGACAACAGTTGAAGTTGAAGAAGGAATGGAGATCGACAGAGGACCAATCGCAAGCTCCGAATTGAGGATTGGCAGTAATGCATGA 861 0.4518 MREDGHIMLSDFDLSLRCAVSPTFVKSSNSSLETKSSGYCIQPACIEPTCAQGLTRKVNHSGRLNYKQQTNRFSVKASAKEIAFDQNSRAALQAGIDKLTDAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVLGLVEELEKKARAVKGGDDIKAVATISAGNDELIGKMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGPIASSELRIGSNA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00827 286 PRINTS Tailless complex polypeptide 1 (chaperone) signature 156 175 IPR017998 GO:0140662
Rops8g00827 286 PRINTS Tailless complex polypeptide 1 (chaperone) signature 122 140 IPR017998 GO:0140662
Rops8g00827 286 PRINTS Tailless complex polypeptide 1 (chaperone) signature 101 117 IPR017998 GO:0140662
Rops8g00827 286 Gene3D GroEL 267 276 IPR027409 -
Rops8g00827 286 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 70 275 IPR001844 GO:0042026|GO:0140662
Rops8g00827 286 Gene3D - 212 266 IPR027410 -
Rops8g00827 286 SUPERFAMILY GroEL equatorial domain-like 79 271 IPR027413 -
Rops8g00827 286 Gene3D - 82 211 IPR027413 -
Rops8g00827 286 Pfam TCP-1/cpn60 chaperonin family 99 277 IPR002423 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00827 Rops-Chr8 17653125 17654248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00827 1 74 AGC Kinase Gene Family AT3G27580 48.148 2.85e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00827 - - gmx:100775463 382.104