Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00825 ATGCTTAATGATGACACAAAAGCAGTTGCATTTGATTGGGAAAAGAAGGTGAATGTTGTTAAAGGTGTGGCCAATGCATTATCATATATGCATCATAACTGCTCTCCTCCAATAGTTCATCGTGACATATCAAGCAAGAATGTTCTTTTGGATTCAGAATATGAAGCTTATCTTTCTGATTTTGGAACAGCTAAGTTTTTGAAGCCTGATGCACATAGTTGGACTACATTTTCAGGCACCTTTGTATATGCAGCTCCAGAAGAATTGGACTATTCCCTAAGCAAGAATTAG 291 0.3711 MLNDDTKAVAFDWEKKVNVVKGVANALSYMHHNCSPPIVHRDISSKNVLLDSEYEAYLSDFGTAKFLKPDAHSWTTFSGTFVYAAPEELDYSLSKN* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00825 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00825 96 ProSitePatterns Tyrosine protein kinases specific active-site signature. 38 50 IPR008266 GO:0004672|GO:0006468
Rops8g00825 96 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Rops8g00825 96 PANTHER LEUCINE RICH REPEAT KINASE 2 2 87 - -
Rops8g00825 96 SUPERFAMILY Protein kinase-like (PK-like) 7 92 IPR011009 -
Rops8g00825 96 Pfam Protein kinase domain 10 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00825 Rops-Chr8 17396092 17396488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00825 1 95 Receptor kinase-like Gene Family AT4G08850 58.947 1.58e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g00825 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00825 - - gmx:100812486 156.377