Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00820 ATGATTCCAAAGTTGGACTTGAAAGAAGTCTTCATTCGATATGCACAAGTCGTGTCAGATGATGACATTCAAACAGCAATGTTGGAGGGTCCAAGAGCAAAGTTTGAATCATCAGGGAGTCTAATCTACGAATCCTTGAAGTGTGAACAACCAACAGGCCAAGAACTGTTGAGTCATATGCACCTCTTGTATCAGGTTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGTTGTCATCGGAGAAACAATGCAATACGAATCAAGAATTCATATAATTGACTTCCAAATTGCTCAGGGCACACAATGGTTATTACTTATCAAAGCTCTTGCATGTCGTCCAAGTGGACCTCCATTAATTCGTGTAACCGGCGTTGATGATTCCCAATCATATCGTGCTCGGGGTGGAGGACTTCATATTGTAGGAAAACGGCTCTCAGATTATGCCAAGTCTTGTGGAATACCATTTGAGTTCCATAGTGCTGCCATGTCGGGCTGTGAGGTTGAACCGGAAAACCTTGTAGTCGTACCTGGGGAAGCTCTGGCTGTGAATTTCCCTTTCATTTTGCACCATATGCCGGATGAGAGTGTGAGAGTGGATGGCCAAAAGGAGGCACTTGTGACAGAATGCATGTTGCTCCATGCAATATAA 654 0.4358 MIPKLDLKEVFIRYAQVVSDDDIQTAMLEGPRAKFESSGSLIYESLKCEQPTGQELLSHMHLLYQVCPYWKFAYTSANVVIGETMQYESRIHIIDFQIAQGTQWLLLIKALACRPSGPPLIRVTGVDDSQSYRARGGGLHIVGKRLSDYAKSCGIPFEFHSAAMSGCEVEPENLVVVPGEALAVNFPFILHHMPDESVRVDGQKEALVTECMLLHAI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00820 217 ProSiteProfiles GRAS family profile. 1 217 IPR005202 -
Rops8g00820 217 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 198 IPR005202 -
Rops8g00820 217 Pfam GRAS domain family 26 207 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00820 Rops-Chr8 17208396 17209049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00820 1 208 GRAS Transcription Factor Family AT4G17230 55.603 3.99e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops8g00820 GRAS 1.5e-48 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00820 - - gmx:100817987 322.398