Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00816 ATGATTCCAAAGTTGGACTTGAAAGAAGTCTTCATTCGATATGCACAAGCCGTGTCAGATGATGACATTCAAACAGCAATGTTGGAGGGTCCAAGAGCAAAGTTTGAATCATCAGGGAGTCTAATCTACGAATCCTTGAAGTGTGAACAACCAACAGGCCAAGAACTGTTGAGTCATATGCACCTCTTGTATCAGGTTTGCCCATATTGGAAGTTTGCTTACACATCTGCAAATGTTGTCATCGGAGAAGCAATGCAAGACGAATCAAGAATTCATATAATTGACTTCCAAATTGCTCAGGGCACACAATGGTTATTACTTATCAAAGCTCTTGCATGTCGTCCAAGTGGACCTCCATTCATTCGTGTAACCGGCGTTGATGATTCCCAATCATATCGTGCTCGGGGTGGAGGACTTCATATTGTAGGAAAACGGCTCTCAGATTATGCCAAGTCTTGTGGAATACCATTTGAGTTCCATAGTGCTGCCATGTCGGGCTGTGAGGTTGAACCGGAAAACCTTGTAGTCGTACCTGGGGAAGCTCTGACTGTGAATTTCCCTTTCATTTTGCACCATATGCCGGATGAGAGTGTGAGAGTGGATGGCCAAAAGGAGGCACTTGTGACAGAATGCATGTTGCTCCATGCAATATAA 654 0.4404 MIPKLDLKEVFIRYAQAVSDDDIQTAMLEGPRAKFESSGSLIYESLKCEQPTGQELLSHMHLLYQVCPYWKFAYTSANVVIGEAMQDESRIHIIDFQIAQGTQWLLLIKALACRPSGPPFIRVTGVDDSQSYRARGGGLHIVGKRLSDYAKSCGIPFEFHSAAMSGCEVEPENLVVVPGEALTVNFPFILHHMPDESVRVDGQKEALVTECMLLHAI* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00816 217 ProSiteProfiles GRAS family profile. 1 217 IPR005202 -
Rops8g00816 217 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 198 IPR005202 -
Rops8g00816 217 Pfam GRAS domain family 26 207 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00816 Rops-Chr8 17149481 17150134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00816 1 208 GRAS Transcription Factor Family AT4G17230 56.034 4.20e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops8g00816 GRAS 1.1e-48 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00816 - - gmx:100817987 328.946