Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00793 ATGGCCACCGCTCGAGCTGCTGTGGAGGCTACAAGGTTGAGAAAACCTTCAAGTCATGCTAGGGAGCAGTATGCTGCTATTGTGATCCAAACTTCTTTCAGAGGGTATCCGGCAGGAAGAGCTCTTCGAGCACTTAAAGGGTTGGTGAAGTTGCAAGCTTTAGTGAGAGGTCACAATGTTAGGAAGCAAGCAAAGATGACCCTTCGGTGCATGCAGGCTTTGGCTAGAGTACAAACAAGGGTCCTTGACCAACGCATAAGGACTTCCAACTCTTGA 276 0.4891 MATARAAVEATRLRKPSSHAREQYAAIVIQTSFRGYPAGRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALARVQTRVLDQRIRTSNS* 92
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00793 91 Gene3D - 21 85 - -
Rops8g00793 91 ProSiteProfiles IQ motif profile. 46 73 IPR000048 GO:0005515
Rops8g00793 91 ProSiteProfiles IQ motif profile. 22 50 IPR000048 GO:0005515
Rops8g00793 91 PANTHER IQ-DOMAIN 5-RELATED 4 88 - -
Rops8g00793 91 Pfam IQ calmodulin-binding motif 49 65 IPR000048 GO:0005515
Rops8g00793 91 Pfam IQ calmodulin-binding motif 25 36 IPR000048 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops8g00793 Rops-Chr8 16385688 16385963 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00793 19 90 IQD Protein Family AT1G01110 86.111 3.72e-36 125
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00793 - - gmx:100786729 147.132