Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00792 ATGGAGAGGGTTGCAGAGCCAAAGGCACTTCCTAGGACCTTGCCTGTTTTGGTTGAGGTCTCTAATGCTCACACAGCTTCAATAAGAGAAGCTGGTCAGAGACTAACTGGGCAAGATGTTTCAAGTGTGCGTGGGATTTCAGCAAGAGAAGCGAATCAATTTTCAAAAGCAAGGGAAGGCCCTATGACTCGTTTGGCCTCAATCAGAGAAGTGGCTCAGTTGTCAAATGCAAGAATAGTTTTCGTAAGAGAAGATATGGGTTTTGATACACGATCCTCTCAAGAACCTGTCTCCCCTGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTGCCAGAAACCAAAGAACTTATGCCTGATATTGAGACAATGAAGGGAAGCAATTATTTTTTTGGGGAAACTGGTCCAAGTTCATTTTCTGGTGCTAGTCATCCACCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTATGTACCAATAGGTCAAAGCAAATCTGAGGCTGGATGCTTAATGAAGAGCATGTCCTTGAAGGGCCCTTTCTCAGAAGATCTTTCAGTTTGTGTTCCCACTAAGAAACCAAGCCTTGCTGTTGTTTCTCCTGCAGAAATTCTGGTTGAAGAATTGAATGATATAGGGAACTTATGCTCACCATTTGCAGGTGCGCGTGCATCACAGAATACTGAGAACTCTTTCCTCCCCCCTGATTCTGAGGAGAACGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGTAATGTTAGTCCACATAGTAGTATTGATAGCACTAGTGTTGTCAGAACAATGAGCATTGCTACTAGTTGTGCAAGTACATATCGGAGTGAAGCAATCACTAGTGATGGCATGATTAGTTTAGACAGGAATTATGATTGTACTAAAGGAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATCACTGGTAGTGCCAATAAGCCCCACCAAGGGAATGATCCTAGGTGGAAGGCTATCCTTGCTATCCGAGCACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTTAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGTTATTTCGCAATGAAAGTTATGGACAAAGCATCCCTAGCAGCCAGAAAGAAGCTGAATAGGGCACAGACAGAAAGGGAGATATTGCAGTTGTTGGACCATCCATTTCTGCCTACATTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTACACGCAATAGTAAGAGGATGGTTGGTAATAATGATGTGAAGTCTGGTGGGGGTAATTATCTGGACTTCGAGTTCTTTTAG 1485 0.4357 MERVAEPKALPRTLPVLVEVSNAHTASIREAGQRLTGQDVSSVRGISAREANQFSKAREGPMTRLASIREVAQLSNARIVFVREDMGFDTRSSQEPVSPAPTRTWKGKASLPETKELMPDIETMKGSNYFFGETGPSSFSGASHPPEPVDTDLMRTVYVPIGQSKSEAGCLMKSMSLKGPFSEDLSVCVPTKKPSLAVVSPAEILVEELNDIGNLCSPFAGARASQNTENSFLPPDSEENECVWDASLPPSGNVSPHSSIDSTSVVRTMSIATSCASTYRSEAITSDGMISLDRNYDCTKGGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHQGNDPRWKAILAIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYATRNSKRMVGNNDVKSGGGNYLDFEFF* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00792 494 SMART serkin_6 367 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00792 494 MobiDBLite consensus disorder prediction 308 342 - -
Rops8g00792 494 MobiDBLite consensus disorder prediction 226 262 - -
Rops8g00792 494 PANTHER FLIPPASE KINASE 1-RELATED 132 470 - -
Rops8g00792 494 SUPERFAMILY Protein kinase-like (PK-like) 347 469 IPR011009 -
Rops8g00792 494 Pfam Protein kinase domain 368 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00792 494 ProSiteProfiles Protein kinase domain profile. 367 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00792 494 Gene3D Phosphorylase Kinase; domain 1 361 484 - -
Rops8g00792 494 MobiDBLite consensus disorder prediction 303 345 - -
Rops8g00792 494 FunFam Serine/threonine-protein kinase D6PK-like 365 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00792 Rops-Chr8 16343584 16351350 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00792 1 470 AGC Kinase Gene Family AT2G44830 60.950 3.37e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops8g00792 Pkinase 1.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00792 - - gmx:100800019 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g00584 4 15768460 15768870 Rops8g00792 8 16343584 16351350 PCT