Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00791 ATGGAGAGGGTTGCAGAGCCAAAGGCACTTCCTAGGACCTTGCCTGTTTTGGTTGAGGTCTCTAATGCTCACACAGCTTCAATAAGAGAAGCTGGTCAGAGACTAACTGAGCAAGATGTTTCAAGTGTCCATGGGATTTCAGCAAGAGAAGTGAATCAATTTTCGAAAGCAAGGGATGGCCCCATGACTCGTCTGGCCTCCATCAGAGAAGTGGCTCAATTGTCAAATGCAAGAATAGTTTTCGTAAGAGAAGATATGGGATTCGATACACGATCCTCTCAAGAACCTGTCTCCCCTGCACCTACAAGAACATGGAAAGGAAAGGCCTCTTTGCCTGAAACCGAAAATTTTATGCCTGATATTGAGACATTGAACGGAAGCAATGATTTTTTTGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCACCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTATGTACCAATAGGTCAAAGCAAATCTGAGGCTGGATGCTTAATGAAGAGCATGTCCTTGAAGGGTCCTTTCTTGGAAGATCTTTCAATTCGTGTTCCCACTAAGAAACCAAGCCTTGCTATTGTTTCTCCAGAAAGTCTTGTTGAAGAATCAAATTACATGGGGAACTTATCCTCACCATTCGCAGGTGCTCGTGCATCACAGAATACTGAGATCTCTTTCCTCCCCCCTGATTCTGAGGAGAAAGAATGTGTTTGGGATGCTTCTTTGCCTCCAAGTGGCAATGTTAGTCCACATAGTAGTATTGATAGCACTAGTGTTGTCAGAACAATGAGCATCGCTAATAGTTGTGCAAGTACATATCGGAGTGAAGCAATCACTAGTGATGGCATGATTAGTTTAGACAGGAATTGTGATAGTACTAAAGGAAGTGTGAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGTAGTGCCAATAAGCCCCACAAAGGGAATGATCCTAGGTGGAAGGCTATCCTTGCTATCCGAGCACGGGATGGAATTTTGGGCATGAGTCATTTTAAGTTACTTAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGTTATTTCGCAATGAAAGTTATGGACAAAGCATCCCTAGCAGCCAGAAAGAAGTTGAATAGGGCACAGACAGAAAGGGAGATATTGCAGTTGTTGGACCATCCATTTCTGCCTACATTGTATACACATTTTGAGACTGACAGATTCTCCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTTTCGGAGTATGCTGCACGCAATAGTAAGAGGATGGTCGGTAATAATGATATGAAGTCTGGTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG 1479 0.4348 MERVAEPKALPRTLPVLVEVSNAHTASIREAGQRLTEQDVSSVHGISAREVNQFSKARDGPMTRLASIREVAQLSNARIVFVREDMGFDTRSSQEPVSPAPTRTWKGKASLPETENFMPDIETLNGSNDFFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQSKSEAGCLMKSMSLKGPFLEDLSIRVPTKKPSLAIVSPESLVEESNYMGNLSSPFAGARASQNTEISFLPPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIANSCASTYRSEAITSDGMISLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFKLLKRLGCGDIGSVYLSELSATRCYFAMKVMDKASLAARKKLNRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARNSKRMVGNNDMKSGGGKYLDFEFF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00791 492 FunFam Serine/threonine-protein kinase D6PK-like 363 448 - -
Rops8g00791 492 Pfam Protein kinase domain 366 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00791 492 PANTHER FLIPPASE KINASE 1-RELATED 137 468 - -
Rops8g00791 492 SMART serkin_6 365 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00791 492 MobiDBLite consensus disorder prediction 297 338 - -
Rops8g00791 492 Gene3D Phosphorylase Kinase; domain 1 359 482 - -
Rops8g00791 492 ProSiteProfiles Protein kinase domain profile. 365 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00791 492 SUPERFAMILY Protein kinase-like (PK-like) 347 468 IPR011009 -
Rops8g00791 492 MobiDBLite consensus disorder prediction 297 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00791 Rops-Chr8 16325444 16330139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00791 1 468 AGC Kinase Gene Family AT2G44830 61.077 3.70e-172 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops8g00791 Pkinase 1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00791 - - gmx:100800019 801.201