Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00775 ATGTCTCGTCATCACCGTGCAGCCCCTTTGAGGATAACACGACCACCATCCTCATTCGGGTGGATATGCAGGAACTTGCATCTCGGGCAGTGCAATTTGCTGAGAGCTTCGGCTGAAGTTCTGGGAAGGGGTAGTTATGGTACTGCATATAAGGCTATATTGGAGGAGTCAACAACAGTTGTGGTGAAAAGGTTGAAAGAAGTGGTGGTAGGCAAGAGGGACTTTGAACAGCAGATGGAGATTATGGGATGGGTTGGACAGCATGCAAATGTCGTGCCACTTCGCGCTTACTATTATTCCAAAGATGAAAAGCTTTTGGTTTATGACTATGTCCCGGGTGGCAACTTATCCACACTCTTGCATGGCAGTCGGACAGATGGAAAAACTCCATTAGATTGGGACTCCCGAGTTAAAATATCACTTGGCACTGCCAAAGGAATCGCTCACATTCATTCTGTTGGTGGTGCCAAATTCACACATGAAAACATTAAGTCCTCTAATGTCCTCATCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCATAACCCCACTTATGAATGTTCCTGCAACCCCTTCTAGAGCTGCAGGTTATCGTGCTCCTGAGGTGATTGAAACCCGAAAGCACTCTCATAAGGCAGATGGGTACAGCTTGGGTGTCCTCCTTCTCGAGACGCTTGCAGGGAAGGCACCTCTCCAATCTCCGGGACGCGAAGATATGGCTAATCTGCTTAAGTGTATTGAAAGTGATGTTTTAATAAATTTGAAGGACAGTGAGGGCTGGACACCATTGCACTGGGCTGTGGATCGTGGCCACCTTAATGTCACAGAGTTGCTTGCGGAAAGGAATATTGATGTAAATGCAAAGGATAATGATGGGAGTTCCCCACGTGGCATGTGTAAGTCAAACTAG 915 0.4656 MSRHHRAAPLRITRPPSSFGWICRNLHLGQCNLLRASAEVLGRGSYGTAYKAILEESTTVVVKRLKEVVVGKRDFEQQMEIMGWVGQHANVVPLRAYYYSKDEKLLVYDYVPGGNLSTLLHGSRTDGKTPLDWDSRVKISLGTAKGIAHIHSVGGAKFTHENIKSSNVLINQDNDGCISDFGITPLMNVPATPSRAAGYRAPEVIETRKHSHKADGYSLGVLLLETLAGKAPLQSPGREDMANLLKCIESDVLINLKDSEGWTPLHWAVDRGHLNVTELLAERNIDVNAKDNDGSSPRGMCKSN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00775 304 SUPERFAMILY Protein kinase-like (PK-like) 39 245 IPR011009 -
Rops8g00775 304 Gene3D Phosphorylase Kinase; domain 1 36 110 - -
Rops8g00775 304 PANTHER OS05G0588300 PROTEIN 32 235 - -
Rops8g00775 304 Pfam Ankyrin repeats (many copies) 252 297 IPR002110 GO:0005515
Rops8g00775 304 ProSiteProfiles Ankyrin repeat region circular profile. 260 292 - -
Rops8g00775 304 Pfam Protein kinase domain 38 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00775 304 SMART ANK_2a 260 289 IPR002110 GO:0005515
Rops8g00775 304 Gene3D Transferase(Phosphotransferase) domain 1 111 264 - -
Rops8g00775 304 SUPERFAMILY Ankyrin repeat 237 301 IPR036770 -
Rops8g00775 304 ProSiteProfiles Ankyrin repeat profile. 260 292 IPR002110 GO:0005515
Rops8g00775 304 ProSiteProfiles Protein kinase domain profile. 35 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00775 304 ProSitePatterns Protein kinases ATP-binding region signature. 41 72 IPR017441 GO:0005524
Rops8g00775 304 Gene3D - 265 304 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00775 Rops-Chr8 16048669 16049739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00775 32 263 Receptor kinase-like Gene Family AT5G58300 69.828 2.25e-113 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops8g00775 Pkinase 4.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00775 - - gmx:100796171 378.637