Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00769 ATGGCATTGTTTGATGCTGCTCCTTCATCTTCTTCCTTTTGCTCCCATTTCTGGTCGTCGGCGCTTCGATCTAAGCGCCTCGTCTCGCCGGCGGAGAAGGCCGCCCGTGACAATTCCGGCCGGGGCCTCTCCCGCCGTCTCGGAGTCGTAGACCTCGTCCTCATCGGTATCGGAGCCTCCATCGGCGCCGGAATCTTCGTCGTCACAGGCACCGTCGCTCGCGACGCCGGTCCCGGAGTAACCATAAGTTTTATACTTGCGGGAGCATCCTGTGTCATAAATGCACTCTGTTATGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGAGCATATTTATATGCATATACAGCTTTTAACGAACTTACAGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGGGCAGCTAGCATAGCGAGAAGCCTAGCAAATTATCTAGTAAATATTCTAGAGCTCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGACACGGTGAAGACATTGGAGGCGTGCTATCCATCAATATCTTAGCTCCAATTCTTCTAATGCTTCTCACTCTAATTCTCTGTCGGGGTGTTGGAGAATCATCAGCTGTGAATTCGTTTATGACAGTGACCAAGGTAGTCATTGTTATCATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCCCCCTTTGCTCCAAATGGCATAAAAAGCATATTTACTGGAGCCACCATAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAGGCCACAGCGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTAGTATGTATTGCATTGTACATTGGAGTATGCTTAGTGATTACAGGAATGGTTCCATACAAGCTTCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTCACATCTAAGGGATTAAAATTTGTTTCTGTTCTGATTAGCATTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGCTATACCTTGGGCTTGGCAGGGATGGTTTACTACCCTCGATATTTGCTAGAGTTCACTCCAAACGCCACACCCCAATTCATTCTCAGGTTTGGGTTGGCTGTGTTGCCAGTGTTTTGGCTGGGCTATTGAATGTGCACATGCTCTCACACATTCTCTCTGTTGGTACCCTGACCGGCTATTCAGTTGTCTCAGCATGTGTTGTTGTACTTCGCTGGAAAGACAAGACAAATAGCCAAGTATCATCTTCAACTAAACGTGAAGGTGTACTTTGCATTATTGCTGTTGCTGTTAGTGGATTTGCTGGCGGGCTCTTATTCCGTTTTGATGCTTCTCCTTTTTTTCTGATTCTGGCTTTAGTTATCGCAGCAAGTGCTTCTGCTGCTCTTATTTTCCGCCAGGTTTATGCAGATGCACCAGGATTTTCTTGCCCTTGGGTTCCCCTTCTGCCAAATATTTGCATCTTTATGAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTTTTAGTATTTTCATGGTTGGTGTTTATGCAATATATGGCCAGTACCATGCTGACCCTAGTGCAGAAGAGAATTCTATTTATCAAGTGGCACCAGAGGAAGAAGCTCAATGA 1683 0.4492 MALFDAAPSSSSFCSHFWSSALRSKRLVSPAEKAARDNSGRGLSRRLGVVDLVLIGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLANYLVNILELFPVFKDNIPKWIGHGEDIGGVLSINILAPILLMLLTLILCRGVGESSAVNSFMTVTKVVIVIIVIFAGAFEVDVSNWSPFAPNGIKSIFTGATIVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYKLLGEDAPLAEAFTSKGLKFVSVLISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPSIFARVHSKRHTPIHSQVWVGCVASVLAGLLNVHMLSHILSVGTLTGYSVVSACVVVLRWKDKTNSQVSSSTKREGVLCIIAVAVSGFAGGLLFRFDASPFFLILALVIAASASAALIFRQVYADAPGFSCPWVPLLPNICIFMNMFLFAQLHHEAWVRFVIFSIFMVGVYAIYGQYHADPSAEENSIYQVAPEEEAQ* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00769 560 Pfam Amino acid permease 47 456 IPR002293 GO:0016020|GO:0022857|GO:0055085
Rops8g00769 560 PIRSF AA_transporter 31 560 - -
Rops8g00769 560 Pfam C-terminus of AA_permease 491 540 IPR029485 -
Rops8g00769 560 Gene3D Amino acid/polyamine transporter I 43 475 - -
Rops8g00769 560 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 38 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00769 Rops-Chr8 15952105 15958998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00769 9 484 Organic Solute Cotransporters AT1G05940 72.557 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00769 K03294 - gmx:100804988 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00769 8 15952105 15958998 Rops8g00769 8 15952105 15958998 ECH
Rops5g01282 5 26951068 26953614 Rops8g00769 8 15952105 15958998 PCT