Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00758 ATGGTAGCATCAACCATAGATGTTGTCTTGCTTTCACATCTGGATACACTTCACCTTGGTGCACTCCCATATGTTATGAAGCAACTTGGACTTTCGGCCCCTGTTTATTCAACTGAGCCTGTCTACAGATTGGGCCTTCTTACTATGTATGACCAGTTCTTCTCAAGAAAGCAAGTATTGGAGTGTGACCTGTTCACGCTAGATGATATCGATTTTGCTTTCCAAAGTATAACAAGGCTAACATACTCTCAGAATCATCATTTCTCAGGCAAGGGAGAGGGAATTGTGATTGCACCTCATGTCGCTGCACATCTTTTGGGAGCCTTACAGACGTCAAAAGGACAAGAACTTGGAGATATTAGGTGTCTAGCATGGGTGGAGGTGGCTGAATCACTTGAGTTACCTTGCAAGTACTACTCCCTTGGATGTCCAGAAATCCTTCCTTACCACAACAAGCTTAAGCATGAGGCCGGTCAAAATTAG 483 0.4389 MVASTIDVVLLSHLDTLHLGALPYVMKQLGLSAPVYSTEPVYRLGLLTMYDQFFSRKQVLECDLFTLDDIDFAFQSITRLTYSQNHHFSGKGEGIVIAPHVAAHLLGALQTSKGQELGDIRCLAWVEVAESLELPCKYYSLGCPEILPYHNKLKHEAGQN* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00758 160 Gene3D - 1 114 IPR036866 -
Rops8g00758 160 SUPERFAMILY TRAF domain-like 131 157 - -
Rops8g00758 160 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2 2 108 IPR027075 GO:0005847|GO:0006378|GO:0006379
Rops8g00758 160 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 158 IPR013083 -
Rops8g00758 160 SUPERFAMILY Metallo-hydrolase/oxidoreductase 3 108 IPR036866 -
Rops8g00758 160 Pfam Metallo-beta-lactamase superfamily domain 3 108 IPR001279 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00758 Rops-Chr8 15715499 15718163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00758 116 156 C3H Transcription Factor Family AT2G41980 68.293 1.30e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00758 K14402 - gmx:100796817 193.356