Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00726 ATGGGTTATCTGAGCAAAGCTTCCAAGACCCTGAGGAAATCAAATTATGTATCGTTGTTGCGCAAATTCACACCATTAACCAACAGAATAATCCGCCAACCCTCTTCTTTGACCCCTGCACTGTTCTGTTCCCAGTCACGCCAACACAGCACCAAAGAGAAGAGCACCGTAGATTTGAGCCAACACCCTCCAGAACTCATCAGAAACTTCTCGATCATTGCACATGTTGATCATGGTAAGTCCACCCTTGCTGATAGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAGCCTCAGTATCTTGATAAATTGCAGGTGGAGAGAGAAAGGGGAATCACGGTTAAAGCCCAGACAGCAACAATGTTCTATAGGCACAGTATAAATGGTGATAATTGTGGTGATGGTAAGGAGTCACCTAATTTTTTGCTGAATCTTATTGACACTCCTGGGCATGTGGATTTTAGTTATGAAGTGTCAAGGTCACTGGCTGCTTGTCAGGGTGTGCTTTTAGTTGTTGATGCAGCTCAAGGAATCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTGACAATTGTACCTGTCATCAACAAGATTGACCAGCCAACTGCTGATCCTGATCGTGTTAAGGCCCAATTGAAATCAATGTTTGATCTTGATCCAAGTGATGCACTTCTAACATCTGCTAAAACTGGGGAGGGTCTTGGGCAAGTCCTTCCAGCTGTCATAGAGCGCATACCTCCGCCTCCTGGGAGGAGTGAATCTCCTCTACGCATGCTTTTACTTGATTCATATTATGATGAATACAAAGGTGTGATATGCCATGTTGCCGTTATGGATGGTGCCCTGCGAAAGGGGGATAAGATTTCTTCTGCTGCTACTGGTCAGTCATATGAAGCTTTGGATATAGGCATCATGCATCCTGAACTTACACCTACTGGAATCTTGCTCACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGGTCAACCAAAGAGGCACGTGTTGGAGATACAATTTACCATACACGATGCACTGTAGAGTCTCTTCCAGGCTTCAAGCCAGCAAAACACATGGTGTTCTCTGGTCTTTACCCAGCAGATGGATCTGATTTTGAAGCACTCAACCATGCAGTAGAGAGGCTGACATGCAATGATGCCAGTGTCTCTATTGCTAAAGAAACTAGCACTGCTCTAGGTCTGGGGTTCAGGTGTGGATTTTTAGGCCTTCTACACATGGATGTTTTTCATCAAAGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACTGTCCCTTATATATTTGAGTATTCTGATGGAAGCAAACTAGAAGTTCAGAATCCTGCTTCATTACCCTCTAATCCCAAGCAACGAGTCACAGCCTGTTGGGAACCTACAGTAATAGCTACTATAATTATTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTGTCTCTGAGCGTAGGGGTCAGCAGTTGGAGTATACATTCATTGACAGTCAACGGGTATTCATGAAGTATCGGTTGCCTTTGAGGGAAATTGTTGTTGACTTTTATAATGAATTGAAGAGTATAACATCAGGCTATGCATCATTTGATTATGAGGATTCAGATTATCAACTATCTGATCTGGTGAAACTCGATATTCTCTTGAATGGGCAACCAGTTGATGCAATGGCAACCATTGTTCATAACTCGAAAGCATATCGTGTTGGGCGTGAACTGGTGGAGAAATTGAAGAAAGTCATAGACAGGCAAATGTTCGAGATATCCATACAAGCTACAATTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCTGCAATGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGTGATGTTACTCGAAAGAGGAAGCTATTGGAGAAACAGAAGGAAGGAAAGAAGCGAATGAAACGGCCATTGGTTTTGTAA 1971 0.4323 MGYLSKASKTLRKSNYVSLLRKFTPLTNRIIRQPSSLTPALFCSQSRQHSTKEKSTVDLSQHPPELIRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYRHSINGDNCGDGKESPNFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGIQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGEGLGQVLPAVIERIPPPPGRSESPLRMLLLDSYYDEYKGVICHVAVMDGALRKGDKISSAATGQSYEALDIGIMHPELTPTGILLTGQVGYVVSGMRSTKEARVGDTIYHTRCTVESLPGFKPAKHMVFSGLYPADGSDFEALNHAVERLTCNDASVSIAKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLEVQNPASLPSNPKQRVTACWEPTVIATIIIPSEYVGPVITLVSERRGQQLEYTFIDSQRVFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSDYQLSDLVKLDILLNGQPVDAMATIVHNSKAYRVGRELVEKLKKVIDRQMFEISIQATIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRPLVL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00726 656 FunFam Translation factor GUF1, mitochondrial 554 628 - -
Rops8g00726 656 SUPERFAMILY Translation proteins 255 351 IPR009000 -
Rops8g00726 656 CDD EF4_III 365 440 - -
Rops8g00726 656 Pfam GTP-binding protein LepA C-terminus 562 652 IPR013842 -
Rops8g00726 656 Gene3D Elongation Factor G (Translational Gtpase), domain 3 358 439 - -
Rops8g00726 656 Gene3D - 554 628 IPR038363 -
Rops8g00726 656 FunFam Translation factor GUF1, mitochondrial 259 357 - -
Rops8g00726 656 CDD LepA 68 256 - -
Rops8g00726 656 SUPERFAMILY EF-G C-terminal domain-like 474 568 IPR035647 -
Rops8g00726 656 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 105 120 IPR031157 -
Rops8g00726 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 278 IPR027417 -
Rops8g00726 656 Pfam Elongation factor Tu GTP binding domain 67 254 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 CDD lepA_C 475 554 IPR035654 -
Rops8g00726 656 NCBIfam translation elongation factor 4 66 652 IPR006297 GO:0005525
Rops8g00726 656 FunFam Elongation factor 4 64 258 - -
Rops8g00726 656 Gene3D Translation factors 260 356 - -
Rops8g00726 656 FunFam Translation factor GUF1, mitochondrial 440 552 - -
Rops8g00726 656 PRINTS GTP-binding elongation factor signature 147 157 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 PRINTS GTP-binding elongation factor signature 199 208 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 PRINTS GTP-binding elongation factor signature 69 82 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 PRINTS GTP-binding elongation factor signature 112 120 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 NCBIfam small GTP-binding protein domain 70 241 IPR005225 GO:0005525
Rops8g00726 656 Pfam Elongation factor G C-terminus 475 559 IPR000640 -
Rops8g00726 656 CDD EF4_II 264 349 - -
Rops8g00726 656 PANTHER TRANSLATION FACTOR GUF1-RELATED 44 652 IPR006297 GO:0005525
Rops8g00726 656 Gene3D - 65 258 IPR027417 -
Rops8g00726 656 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 65 257 IPR000795 GO:0003924|GO:0005525
Rops8g00726 656 Hamap Elongation factor 4 [lepA]. 63 656 IPR006297 GO:0005525
Rops8g00726 656 FunFam Translation factor GUF1, mitochondrial 358 439 - -
Rops8g00726 656 SUPERFAMILY EF-G C-terminal domain-like 366 443 IPR035647 -
Rops8g00726 656 Gene3D - 440 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00726 Rops-Chr8 15122497 15127404 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00726 67 208 Eukaryotic Initiation Factors Gene Family AT1G56070 40.972 3.46e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00726 K21594 - gmx:100781092 1177.54