Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00716 ATGGTGGTAGTAGTAGCTTGGTGCAGTGTATTTGTTATCTCTTGGACTAGTTTCTGCATTGCAATTACATCTGAATCATCACCACTAGACATAGAAGCACAAGCTCTACTTGAAAGTGGGTGGTGGAGTGACTACACTAACTATGTTCCAAATCGTTGCCAATGGCCAGGCATTACATGCAACAATGCTGGAAGCATCACCAACATCTCATTGCCAGCTGATACCCAATTGGGAGACAAGTTTGGTAGATTCAACTTCTCTTCCTTCCCAAACCTTGTTCACCTCAATCTTGCTTCACATGGACTAACTGGGATCATCCCATATGAACTAGGTATTCTTTCCAAACTTACTTATCTTGATCTATCTTCCAATGATATTCAGGGACATATACCATCAAGCATTTGGAATCTAAGGAATCTGGTGACCTTAAACCTGGCTAAAAACAAGCTTAATGGTTCAATTCCATCATCTGTGGGTCAGCTGAGTAAGTTGACCTCTTTGTTTCTTGATAACAATCTGATTAGTGGGTTTATTCCTCCAGAATTAGGAAGGCTAAAAAATCTGATTCATTTGGGTCTGAATGATAATAGTTTTATTGGTCCAATACCTGTGGAGATTGGTCTATTGAGCAGTTTGAAATATCTGTCTCTCAGTGTCAATAAGTTGAATGGCTCTATACCTTTAGAAATAGGGAAGTTGAACAATCTTATATCTCTGGATCTCAATTCTAACAATCTCACTGGTGAAATACTTCCAGTTTTGCAGAATCTAACCAATTTGACTGAACTAAACTTGTCGAACAATGAGATTTCTGGTATAGTACCAAGTGAGCTTACCCATTTGACCCAACTGGAGGATCTGAATATTTCAACTAACAAAATTTTTGGTACAATACCTCATGAAATTGGAAAATTGTCCAAACTATTGGTTTTAGACCTGTCTAGAAACATGTTGAATGGAGAAATCCCAGCTAGTCTTTCCACTTGCTCTGACTTACAGGTGTTGACTTTGAGCCATAACCAGATAACTGGAAGCATTCCCTCTCATAATGGTGATCTTGTTAATCTTGATTTAATTGATTTGAGTCATAACTTAATCAGTGGAGAAATACCTTATCAACTTGGGAATGTGAAATACACAAGGTCCTTGGATCTAAGTTATAATAATCTCACTGGAACTATTCCCAGTTCCTTAGTATTATTGAGGAGTTTAAACTTGTCCCACAATTCCCTAGAGGGTAAGATCCCAGTTAGTCTCCAAAATTTTAATCCACCTGATGCATTCATTGGCAATGAGTGTTTATGTGACCAAATCACATCCTTCTCTACTTGTCACTCGTCTCCTTCCGGAACAAATAACAGACTCAGGACCCATATGAAGATTTTCCTTCCTCTCATAGCTTTTCTGGCTCTTCTGTGCTCTATGTATGTATTCCTCCGCTGGTGTAAGGCTAGAAGTCCCAAGTTTGAAACAAAAGCAATAAAGAATGGTGACCTGTTTTCAATATGGAACTATGATGGTAAAATTGCATATGAAGACATAATTGAAGCAACGGAGGGTTTTGACAACAAATATTGCATAGGAACTGGTGGTTGTGGTAGTGTCTACAAAGCAGAGTTACCTAGTGGTAGAGTAGTGGCCTTGAAGAAACTTCACAATTTAGAAGCCAATGAACCAGCAATCCGCAGGATTTTCAAGAATGAAGTGAGAATGTTGACAAAGATAAGGCATAGAAATATTGTGAAGCTTTATGGATTCTGCTTGCACAACAGATGCATGTTTCTGGTTTTGGAATACATGGAAAGGGGAAGCTTATATTGTGTTTTACACAATGACATTGAAGCTGTGGAGTTGGATTGGACCAAGAGGGTGAACATTGTGAAAGGCATAGCACACAGCTTATCATACCTTCATTATGATTGCAAGCCAGCAATTATTCATAGAGATGTAACAACCAAAAATGTTCTCTTGAATTTAGAAATGGAGGCTTGTCTATCTGACTTTGGCATAGCCAGACTTCTAAATCCTGGTTCCTCTAATCGAACAGTACTTGCTGGCACTTGTGGATATCTTGCACCAGAACTTGCCTATTCTGATTCTGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAGTTGCTGCTCTTGAAATTATCATGGGAAAGCATCCTGGAGAACTTGTTTCCTCGTTAAGATCTGCATCCACTCAAAGCATTCTCCTCAAAGAAATATTAGACCCAAGATTAATATCCACCATCAATCAACAATCTGCACAGAGTTTAGCTCTTATAGCAACACTAGCCTTTGCATGTCTTCATTCTCAGCCAAGGCATAGACCAACAATGCAAACAGTTTGTGACAAACTTGTCACAGGAAAGCTTCAATTAACCAAACCTTTTGAAGAAATTTCAATAAGGCTGATGATAAATCAGGAATTGTAA 2439 0.3862 MVVVVAWCSVFVISWTSFCIAITSESSPLDIEAQALLESGWWSDYTNYVPNRCQWPGITCNNAGSITNISLPADTQLGDKFGRFNFSSFPNLVHLNLASHGLTGIIPYELGILSKLTYLDLSSNDIQGHIPSSIWNLRNLVTLNLAKNKLNGSIPSSVGQLSKLTSLFLDNNLISGFIPPELGRLKNLIHLGLNDNSFIGPIPVEIGLLSSLKYLSLSVNKLNGSIPLEIGKLNNLISLDLNSNNLTGEILPVLQNLTNLTELNLSNNEISGIVPSELTHLTQLEDLNISTNKIFGTIPHEIGKLSKLLVLDLSRNMLNGEIPASLSTCSDLQVLTLSHNQITGSIPSHNGDLVNLDLIDLSHNLISGEIPYQLGNVKYTRSLDLSYNNLTGTIPSSLVLLRSLNLSHNSLEGKIPVSLQNFNPPDAFIGNECLCDQITSFSTCHSSPSGTNNRLRTHMKIFLPLIAFLALLCSMYVFLRWCKARSPKFETKAIKNGDLFSIWNYDGKIAYEDIIEATEGFDNKYCIGTGGCGSVYKAELPSGRVVALKKLHNLEANEPAIRRIFKNEVRMLTKIRHRNIVKLYGFCLHNRCMFLVLEYMERGSLYCVLHNDIEAVELDWTKRVNIVKGIAHSLSYLHYDCKPAIIHRDVTTKNVLLNLEMEACLSDFGIARLLNPGSSNRTVLAGTCGYLAPELAYSDSVTEKCDVFSFGVAALEIIMGKHPGELVSSLRSASTQSILLKEILDPRLISTINQQSAQSLALIATLAFACLHSQPRHRPTMQTVCDKLVTGKLQLTKPFEEISIRLMINQEL* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00716 812 Gene3D Ribonuclease Inhibitor 167 447 IPR032675 -
Rops8g00716 812 Gene3D Ribonuclease Inhibitor 46 166 IPR032675 -
Rops8g00716 812 SMART LRR_sd22_2 257 289 - -
Rops8g00716 812 SMART LRR_sd22_2 113 139 - -
Rops8g00716 812 SMART LRR_sd22_2 161 190 - -
Rops8g00716 812 SMART LRR_sd22_2 209 230 - -
Rops8g00716 812 SMART LRR_sd22_2 353 368 - -
Rops8g00716 812 FunFam Leucine-rich repeat receptor protein kinase MSP1 484 599 - -
Rops8g00716 812 SUPERFAMILY RNI-like 94 420 - -
Rops8g00716 812 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Rops8g00716 812 Pfam Protein kinase domain 524 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00716 812 Pfam Leucine Rich Repeat 401 422 IPR001611 GO:0005515
Rops8g00716 812 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 229 448 - -
Rops8g00716 812 ProSiteProfiles Leucine-rich repeat profile. 259 282 IPR001611 GO:0005515
Rops8g00716 812 SMART LRR_typ_2 257 280 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 113 137 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 161 185 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 209 233 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 353 377 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 305 329 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 398 421 IPR003591 -
Rops8g00716 812 SMART LRR_typ_2 281 304 IPR003591 -
Rops8g00716 812 ProSitePatterns Tyrosine protein kinases specific active-site signature. 645 657 IPR008266 GO:0004672|GO:0006468
Rops8g00716 812 FunFam Nuclear pore complex protein NUP107 21 179 - -
Rops8g00716 812 ProSiteProfiles Protein kinase domain profile. 521 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00716 812 Pfam Leucine rich repeat 254 294 IPR001611 GO:0005515
Rops8g00716 812 Pfam Leucine rich repeat 90 150 IPR001611 GO:0005515
Rops8g00716 812 SUPERFAMILY Protein kinase-like (PK-like) 503 788 IPR011009 -
Rops8g00716 812 Gene3D Transferase(Phosphotransferase) domain 1 600 801 - -
Rops8g00716 812 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 195 789 - -
Rops8g00716 812 FunFam Leucine-rich repeat receptor-like protein kinase 600 797 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00716 Rops-Chr8 14857181 14859788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00716 92 693 Receptor kinase-like Gene Family AT4G08850 40.163 7.31e-141 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g00716 Pkinase 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00716 - - aprc:113863342 1184.09