Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00715 ATGGCTTCGGCAATACACAATAATATGGTGGGAGTAGCTTGGTGCAGTGTATTTATTATCTTTTGGACTAGTTTCTGTATTGCAATTACATCTGAATCATCACTAGACATGGAAGCACAAGCTCTAGTTGACAGTGGGTGGTGGAGTGGCTACACTAACCATGTTTCAAGTCGTTGCCATTGGCCAGGCATCACATGCAACGATGCTGGAAGCATTACACGCATTACTTTGCTCACTGTTAACCAATTGGGAGACAAGTTTGGGAGATTCAACTTCTCTTCCTTCCCAAACCTTGTTTATCTCAATCTTGCTTCACAAGGACTCACTGGGAACATCCCATATGAACTAGGTACTCTTTCCAACCTTGCTTATCTTTATCTATCTTCTAATGATATTCAGGGATATATACCACCAAACATTTGGAATCTAAGGAATATGATGACCCTGGACCTGGCTCACAACAGGCTTAATGGTTCACTTCCATCTTCTGTGGGTCAGTTGACAAAGTTGACCTCTTTGTGTCTTGATAACAATCTGATTAGTGGGTCTATTCCTCCAGAGTTAGGAAGGCTAAAATATCTGAGTCATTTGAGCATGAATAACAATAATTTCATTGGTCCAATACCTGTGGAGATTGGTCTATTGAGCAGTTTGATATATCTGTCTCTCAGTGACAACAAGTTGAATGGTTCCATACCTTCAAAAATAGGGAGTTTGAACAACCTTCTATATCTGTATCTTAATGATAACAATCTCACAAGTGAAATACTTTCAGTTTTGCATAATCTAACCAATTTGATTGAACTAAACTTGTCGAACAATGAGATTTCTGGTATAGGCCCAGGTGAGCTTACCCATTTGACTCAACTGGAGTATCTGAATATTTCAGATAACAAAATTTTTGGTGCAATACCTCATGAAATTGTAAATTTGTCGAAACTTTCGGTTTTAGACCTGTCCAGAAACATGTTGAATGGAGAAATCCCAGCTAGTCTTTCCACTTGCTCTCTCCTGCGGGTGTTGACTTTGAGCCATAACCAAATAACCGGAAGCATTCCCTCTGATATTGGTGATCTTTATGAACTTGATTTAATTGATTTGAGTCATAACTTAATCAGTGGAGAAATACCTTATCAACTAGGGAATGTGACATACTTGGATCTCAGTTATAATCAACTCACTGGAACCATTCCCAGTTCCCTACGATTCTGGCAGAGGATAAACTTGTCTTATAATTCTCTAGAGGGTGAGATCCCAGTTCGTCTGCTGAAGTCTTTTACACCTGATGCATTCATTGGCAATGAGCATTTATGTGGCCAATTCACACCGTTCCCTTCTTGTTACTCCTCTTCACCCAGAACAAATAATAGACTCAGGACCCATATGAAGATTTTCCTTCCTCTCACGGCTTTTCTGGCTCTTCTATGCAATGTCTATGTGTTCCTCCGCTGGTATAAGACTAGGAGTTCCAAGTCTGAAACAATATCAATAAAAAATGGTGACCTGTTTACAATATGGAACTATGATGGTAAAATTGCATATGAAGACATAATTGAAGCCACAGAGGGTTTCGACAACAAATATTGTTTAGGAACTGGTGGTTATGGTAGTGTCTACAAAGCTCAGTTACCTAGTGGTAGAGTAGTGGTCTTGAAGAAACTTCACAATTTAGAAGCCAATGAACCAGCAATCCGCAGGATTTTCAAGAATGAAGTGAGAATGTTGACAAAGATAAGGCATAGAAATATTGTGAAGCTTTATGGATTCTGCTTGCACAACAGATGCATGTTTCTGGTTTTGGAATACATGGAAAGGGGAAGCTTATATTGTGTTTTACACAATGACATTGAAGCTGTGGAGTTGGATTGGACCAAGAGGGTGAACATTGTGAAAGGCATAGCACACAGCTTATCATACCTTCATTATGATTGCAAGCCAGCAATTATTCATAGAGATGTAACAACCAAAAATGTTCTCTTGAATTTAGAAATGGAGGCTTGTCTGTCTGACTTTGGCATAGCCAGACTTCTAAATCCTGGTTCCTCTAATCGAACAGTACTTGCTGGCACTTGTGGATATCTTGCACCAGAACTTGCCTATACTGATTCTGTGACTGAGAAATGTGATGTGTTCAGCTTTGGAATTGTTGCTCTTGAAATTATCATCTGGAGAACTTGTTTCCTCGTTAAGATCTGCATCCACTCAAAGCATTCTCCTCAAAGATATATTAGACCCAAGATTAATATCCACCATCAATCGACAATCTGCACAGAGTTTAGCTCTTATAGCAACGCTAGCCTTTGCATGTCTTCATTCTCAGCCAAGGCATAG 2331 0.3943 MASAIHNNMVGVAWCSVFIIFWTSFCIAITSESSLDMEAQALVDSGWWSGYTNHVSSRCHWPGITCNDAGSITRITLLTVNQLGDKFGRFNFSSFPNLVYLNLASQGLTGNIPYELGTLSNLAYLYLSSNDIQGYIPPNIWNLRNMMTLDLAHNRLNGSLPSSVGQLTKLTSLCLDNNLISGSIPPELGRLKYLSHLSMNNNNFIGPIPVEIGLLSSLIYLSLSDNKLNGSIPSKIGSLNNLLYLYLNDNNLTSEILSVLHNLTNLIELNLSNNEISGIGPGELTHLTQLEYLNISDNKIFGAIPHEIVNLSKLSVLDLSRNMLNGEIPASLSTCSLLRVLTLSHNQITGSIPSDIGDLYELDLIDLSHNLISGEIPYQLGNVTYLDLSYNQLTGTIPSSLRFWQRINLSYNSLEGEIPVRLLKSFTPDAFIGNEHLCGQFTPFPSCYSSSPRTNNRLRTHMKIFLPLTAFLALLCNVYVFLRWYKTRSSKSETISIKNGDLFTIWNYDGKIAYEDIIEATEGFDNKYCLGTGGYGSVYKAQLPSGRVVVLKKLHNLEANEPAIRRIFKNEVRMLTKIRHRNIVKLYGFCLHNRCMFLVLEYMERGSLYCVLHNDIEAVELDWTKRVNIVKGIAHSLSYLHYDCKPAIIHRDVTTKNVLLNLEMEACLSDFGIARLLNPGSSNRTVLAGTCGYLAPELAYTDSVTEKCDVFSFGIVALEIIIWRTCFLVKICIHSKHSPQRYIRPKINIHHQSTICTEFSSYSNASLCMSSFSAKA* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00715 776 FunFam Leucine-rich repeat receptor protein kinase MSP1 487 602 - -
Rops8g00715 776 SUPERFAMILY L domain-like 51 433 - -
Rops8g00715 776 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 197 738 - -
Rops8g00715 776 Gene3D Phosphorylase Kinase; domain 1 485 602 - -
Rops8g00715 776 FunFam Os07g0541700 protein 603 690 - -
Rops8g00715 776 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Rops8g00715 776 Pfam Leucine Rich Repeat 382 402 IPR001611 GO:0005515
Rops8g00715 776 Pfam Leucine rich repeat 250 300 IPR001611 GO:0005515
Rops8g00715 776 Pfam Leucine rich repeat 313 372 IPR001611 GO:0005515
Rops8g00715 776 ProSiteProfiles Leucine-rich repeat profile. 265 286 IPR001611 GO:0005515
Rops8g00715 776 Pfam Protein kinase domain 528 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00715 776 SMART LRR_sd22_2 167 196 - -
Rops8g00715 776 SMART LRR_sd22_2 119 145 - -
Rops8g00715 776 SMART LRR_sd22_2 380 403 - -
Rops8g00715 776 SMART LRR_sd22_2 287 313 - -
Rops8g00715 776 SMART LRR_sd22_2 215 241 - -
Rops8g00715 776 SUPERFAMILY Protein kinase-like (PK-like) 506 730 IPR011009 -
Rops8g00715 776 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Rops8g00715 776 ProSitePatterns Tyrosine protein kinases specific active-site signature. 648 660 IPR008266 GO:0004672|GO:0006468
Rops8g00715 776 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 195 451 - -
Rops8g00715 776 Gene3D Ribonuclease Inhibitor 194 451 IPR032675 -
Rops8g00715 776 ProSiteProfiles Protein kinase domain profile. 524 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00715 776 Gene3D Transferase(Phosphotransferase) domain 1 603 771 - -
Rops8g00715 776 SMART LRR_typ_2 167 191 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 119 143 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 287 310 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 263 286 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 336 359 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 311 335 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 380 404 IPR003591 -
Rops8g00715 776 SMART LRR_typ_2 215 239 IPR003591 -
Rops8g00715 776 FunFam Nuclear pore complex protein NUP107 28 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00715 Rops-Chr8 14823750 14826305 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00715 70 696 Receptor kinase-like Gene Family AT4G08850 37.032 2.62e-137 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g00715 Pkinase 1.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00715 - - aprc:113863342 969.533