Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00687 ATGGAGGGGACAGACCCAAAAGCATGCAACTTCATCGCTGACACAAATGAGCTTCAAAATCCCAGAATCCTAAAGCAACCCTTTAGTTTTTCTTTTGCAAAACTTGAAGAGAATTACCCTCCTGGTTTTCTCAGAAAGGTATTTGCAGAGGTTATTGGCACCTTCTTATTGGTGTTTGTAGGAAGTGGTTCTGCTGCTCTTAATGCTATTGATGAAAACAAAGTCTCAAAATTGGCAGCTTCACTTGCAGGTGGATTCATCGTGACGGTTATGATTTATGCGATTGGACACATCTCTGGGGCACACATGAATCCAGCTGTCTCCTTAGCTTTTGCCACCGTGAGGCATTTCCCTTGGAAACAGGTCCCATTTTACATTGTAGCTCAGCTGACAGGAGCCATTGGTGCTTCATATACACTGCGAGTGCTGTTACAGCCATCAAGGCAGCTTGGGGCAACATCACCATCTGGATCAAGCATTCAAGCACTAATCATGGAAATAGTATCCACCTTCACCATGGTCTTCATCTCTACTGCCGTTGCCACTGACACAAAAGCTATAGGACAGCTGGCCGGAGTAGCAGTAGGTTCTTCTGTTAGCATAGCAAGCATTGTAGCCGGAAAAGTTTCACTTCCTCTGGTGGTTCAGCTTAAGCAACAACAGTTTGGTCATCACTCTTTCCGGTGGTTCAGTTCAGTCTCTTTCTCTCACTATCATAACTGGCTAGAAGATTTAATTGAAATGCAGTTTGACAACATGGGATCCTCGACCCAACATCACATTGCAATCCCCATAAACAAATTGAGTGCATCCCTGGAAGCTGCAAGGGAAAAGGATACTGTAACCCGTTCCAACACCAATGTCCAAGAACCTGGAGAACAAGGTGGGAAGGCTGAAGAAAAGGGAGAATGCCGTTATTGTCAGGACAAGGAATTTGTTTACAAACTGGAAGCACCCTGTGGTTGCAATGGCAGCTTGAAGGTAGTATAA 990 0.4475 MEGTDPKACNFIADTNELQNPRILKQPFSFSFAKLEENYPPGFLRKVFAEVIGTFLLVFVGSGSAALNAIDENKVSKLAASLAGGFIVTVMIYAIGHISGAHMNPAVSLAFATVRHFPWKQVPFYIVAQLTGAIGASYTLRVLLQPSRQLGATSPSGSSIQALIMEIVSTFTMVFISTAVATDTKAIGQLAGVAVGSSVSIASIVAGKVSLPLVVQLKQQQFGHHSFRWFSSVSFSHYHNWLEDLIEMQFDNMGSSTQHHIAIPINKLSASLEAAREKDTVTRSNTNVQEPGEQGGKAEEKGECRYCQDKEFVYKLEAPCGCNGSLKVV* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00687 329 Gene3D Glycerol uptake facilitator protein. 17 213 IPR023271 -
Rops8g00687 329 SUPERFAMILY Aquaporin-like 38 210 IPR023271 -
Rops8g00687 329 PANTHER AQUAPORIN NIP2-1 35 210 IPR034294 -
Rops8g00687 329 Pfam Major intrinsic protein 43 209 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g00687 329 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g00687 329 PRINTS Major intrinsic protein family signature 84 108 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g00687 329 PRINTS Major intrinsic protein family signature 121 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g00687 329 PRINTS Major intrinsic protein family signature 45 64 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops8g00687 329 MobiDBLite consensus disorder prediction 279 300 - -
Rops8g00687 329 ProSitePatterns MIP family signature. 102 110 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00687 Rops-Chr8 13734709 13741230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00687 14 206 Major Intrinsic Protein MIP AT4G19030 40.796 1.39e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00687 K09874 - gmx:100788071 259.996