Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00686 ATGGAAGGTCAGCAACAGTGTGATGAAGATGTAGCCCTGAACACTCCCCTAATTGTATACCAAAACCAACACTGGCTTGAAAGAAGCCAAATTTCTGGTAACAGTCCCAGCAATGGCACCACGTCTTTCCTCAAGACTTGTTTCAATGGCCTCAATGCTTTGTCAGGGGTTGGGATACTTTCAGTTCCATATGCTCTAGCATCTGGAGGGTGGTTAAGCTTGGCTCTTCTGTTTTCCATTGCTGCTGTAGCCTTTTACTCAGGCTTGTTGATCAAAAGATGTATGGACAAGAATTCAAATTTAAGAACCTATCCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGACTAATAGTATCAATATGCATGTACACGGAGCTCTATTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGTAATTTATTCCCCATTGAAGAACTTCAAGTGGCTGGTTTGGTAATTGGGGGAAAGCAATTATTTGTGATATTGGTTGCCCTTATTATCTTGCCAACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCAGCAAGTGGGGTGTTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGGAGCATTTGATGGAGTTGGTTTTCATCAAAAGGGTACTCTTTTTAAATGGAATGGAATCCCCACAACTGTTAGCTTGTATGCATTTTGTTATTGTGCACATCCAGTCTTCCCCACCCTTTACAATTCCATGAGAAACAAACACCAGTTCTCTAATGTCTTATTTGTATGCTTTCTGTTGACCACTATTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGAGGTAGAATCACAGGTAACATTAAACCTGCCAATAAACAAAATAAGCTCAAGAATAGCAATATGTACTACCTTGGTCAATCCCATAACCAAGTATGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGAATTGTTTCCAAGGATGTACAAGAATAGAGTGACCAGCATCTTAGTCAGCACTGCCTTGGTAATCAGCACTGTCATTGTTGCACTGACTGTTCCTTTCTTTGGGGATCTCATGTCCCTTGTTGGAGCATTTCTGAGTGTCACAGCTTCAATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGCACCTATAGGAAACTTGGGTGTGAGACAATAGCCATAGTGGCAATAATACTAGCAGCTACAGCAATGGGAATATCTGGTACATACACATCAGTCACTGAAATTTTCCACCATTTGTCTTAG 1293 0.4045 MEGQQQCDEDVALNTPLIVYQNQHWLERSQISGNSPSNGTTSFLKTCFNGLNALSGVGILSVPYALASGGWLSLALLFSIAAVAFYSGLLIKRCMDKNSNLRTYPDIGELAFGKIGRLIVSICMYTELYLVSIGFLILEGDNLSNLFPIEELQVAGLVIGGKQLFVILVALIILPTVWLDNLSLLSYVSASGVFASAIIILSISWTGAFDGVGFHQKGTLFKWNGIPTTVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLFVCFLLTTIGYASMAIIGYLMFGPEVESQVTLNLPINKISSRIAICTTLVNPITKYALMATPITNALKELFPRMYKNRVTSILVSTALVISTVIVALTVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYRKLGCETIAIVAIILAATAMGISGTYTSVTEIFHHLS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00686 430 PANTHER OS05G0424000 PROTEIN-RELATED 49 407 - -
Rops8g00686 430 Pfam Transmembrane amino acid transporter protein 40 419 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00686 Rops-Chr8 13695840 13707430 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00686 21 425 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.360 2.80e-176 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00686 K15015 - gmx:100794374 671.774