Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00684 ATGGAAGGTGAGCAACAGTGTGACAATGATGTAGCCCTGAACATTCCCCTGATTGTAGACCAAAACCTTGGAAGGAGCCAAATTTCTGGTAATAACTGTCCCAGCAATGCAACCACATCTTTCTTGAAGACTTGTTTCAATGGCCTCAATGTTTTGTCAGAAAGACTAGACAGAAATTCATCCTTGAGTGTACCTTTACTAACCGAGATTAAGCACCATGAGCTGGTGCATGCCATAGATGAAGAGAAAGTTATAGCCTCTCATCCTTCAACCAAAAGTACCGTGTCTTTATTTCGCACATGTCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCGGTTCCATATGCTCTAGCATCTGGAGGATGGTTAAGCTTAGCCCTTCTGTTTGCTATTGCTGCTGTAGCCTTTTACTCAGGTTTGTTGATAAAAAAATGTATGGACAAGAATTCGAATATTATAACCTATCCTGATATAGGTGAACTTGCATTTGGAAAGATTGGAAGACTAATAGTATCAATATCCATGTACACGGAGCTCTACTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGTAATTTATTCCCCATTCAGGAGCTTCAACTGGCTGGTTTAGCAATTAGTGGAAAGCAATTCTTTGTGATAATTGTTGCCCTTATTATCTTGCCAACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCGGCAAGTGGGGTGTTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGCAGCATTTGATGGAGTTGGTTTTCATCAAAAGGGTACTCTTTTTAATTGGAATGGGATCCCCACAGCTGTTAGTTTGTATGCCTTTTGTTACTGTGCACATCCAGTCTTCCCCACCCTCTACAATTCCATGAGAAACAAACACCAGTTCTCTAAGGTCCTACTTGTGTGCTTTCTGTTTTCCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGAGGTAGAATCACAGGTCACATTAAACCTGCCAATAAACAAAATAAGCTCAAGAATAGCAATATATACTACCTTGGTCAATCCCATAACAAAGTATGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGATTTGTTTCCAAGGATGTACAAGAAAAGAATGACCAGCATCTTAGTCAGCACTGTCTTGGTAATCAGCACAGTCATTCTTGCACTGACTGTTCCTTTCTTTGGGGATCTCATGTCCCTTGTTGGAGCATTTCTGAGTGTCACAGCTTCAATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGCATCTATAGGAAATTTGGGTGTGAGACAATAGCCATAATGGCAATAATACTAGCAGCTATGGCAATGGGAATATCCGGGACATACACATCAGTCACTGAAATTTTCCACCATTTGTCATAG 1455 0.4027 MEGEQQCDNDVALNIPLIVDQNLGRSQISGNNCPSNATTSFLKTCFNGLNVLSERLDRNSSLSVPLLTEIKHHELVHAIDEEKVIASHPSTKSTVSLFRTCLNGLNAISGVGILSVPYALASGGWLSLALLFAIAAVAFYSGLLIKKCMDKNSNIITYPDIGELAFGKIGRLIVSISMYTELYLVSIGFLILEGDNLSNLFPIQELQLAGLAISGKQFFVIIVALIILPTVWLDNLSLLSYVSASGVFASAIIILSISWTAAFDGVGFHQKGTLFNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSKVLLVCFLFSTVGYASMAIIGYLMFGPEVESQVTLNLPINKISSRIAIYTTLVNPITKYALMATPITNALKDLFPRMYKKRMTSILVSTVLVISTVILALTVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGIYRKFGCETIAIMAIILAAMAMGISGTYTSVTEIFHHLS* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00684 484 PANTHER OS05G0424000 PROTEIN-RELATED 104 463 - -
Rops8g00684 484 Pfam Transmembrane amino acid transporter protein 94 473 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00684 Rops-Chr8 13665607 13672262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00684 96 479 Amino Acid or Auxin Permease AAAP Family AT3G28960 62.338 1.54e-175 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00684 K15015 - gmx:100794374 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00684 8 13665607 13672262 Rops8g00684 8 13665607 13672262 ECH