Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00682 ATGGCAGAAAAACTAGACAACAATTCATCCTTGTGTGTGCCTTTACTAACAGAGTGTAAGCACCATGACCCAGTGCATGCCATAGACGAGGAAAAAGTTATAGCCTCTCATCCTTCAACCAAGAATACCGTGTCTTTATTTCGCACATGTCTTAATGGACTCAATGCTATATCAGGTGTTGGGATATTCTCGGTTCCATATGCTCTGGCATCTGGAGGGTGGTTAAGCTTGGCTCTTCTGTTTTCCATTGCTGCTGTAGCCTTTTACTCAGGCTTGTTGATCAAAAGATGTATGGACAAGAATTCGAATTTAAGAACCTATCCTGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGACTAATAGTATCAATATGCATGTACACGGAGCTCTATTTGGTTTCAATAGGGTTCTTGATTCTAGAAGGGGACAACTTGAGTAATTTATTCCCCATTGAAGAACTTCAAGTGGCTGGTTTGGTAATTGGGGGAAAGCAATTATTTGTGATATTGGTTGCCCTTATTATCTTGCCAACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCAGCAAGTGGGGTGTTTGCTTCTGCTATCATCATCTTGTCAATATCATGGACTGGTGCATTTGATGGAGTTGGTTTTCATCAAAAGGGTACTCTTTTTAAATGGAATGGAATCCCCACAACTGTTAGCTTGTATGCATTTTGTTATTGTGCACATCCAGTCTTCCCCACCCTTTACAATTCCATGAGAAACAAACACCAGTTCTCTAATGTCCTACTTGTGTGCTTTCTGTTTTCCACTGTTGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCAGAGGTAGAATCACAGGTCACATTAAACCTGCCAATAAACAAAATAAGCTCAAGAATAGCAATATATACTACCTTGGTCAATCCCATAACCAAGTATGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGATTTGTTTCCAAGGATGTACAAGAATAGAGTGACCAGCATCTCAGTCAGCACTGTCTTGGTAATCAGCACAGTGATTGTTGCACTGACTGTTCCTTTCTTTGGGGATCTCATGTCCCTTGTTGGAGCATTTCTAAGTGTCACAGCTTCAATTCTGCTTCCATGCTTGTGCTACTTAAAGATTTCAGGCAATTATAGGAAATTTGGGTGTGAGACTGTAGCCATAGTGGCAATAATAATAGCAGCTATAGCAATGGGAATATCTGGGACATACACATCAGTCACTGAAATTTTCCACCATTTGTCATAG 1302 0.4002 MAEKLDNNSSLCVPLLTECKHHDPVHAIDEEKVIASHPSTKNTVSLFRTCLNGLNAISGVGIFSVPYALASGGWLSLALLFSIAAVAFYSGLLIKRCMDKNSNLRTYPDIGELAFGKIGRLIVSICMYTELYLVSIGFLILEGDNLSNLFPIEELQVAGLVIGGKQLFVILVALIILPTVWLDNLSLLSYVSASGVFASAIIILSISWTGAFDGVGFHQKGTLFKWNGIPTTVSLYAFCYCAHPVFPTLYNSMRNKHQFSNVLLVCFLFSTVGYASMAIIGYLMFGPEVESQVTLNLPINKISSRIAIYTTLVNPITKYALMATPITNALKDLFPRMYKNRVTSISVSTVLVISTVIVALTVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGNYRKFGCETVAIVAIIIAAIAMGISGTYTSVTEIFHHLS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00682 433 PANTHER OS05G0424000 PROTEIN-RELATED 53 414 - -
Rops8g00682 433 Pfam Transmembrane amino acid transporter protein 43 421 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00682 Rops-Chr8 13595073 13597198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00682 30 428 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.250 5.19e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00682 K15015 - gmx:100794374 704.131