Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00664 ATGTCAACAAAAAATGGAGATTTGTTCTGTATATGGAATTATGATGGAAACATGGCATACGAAGACATCATCAGAGTAACAGAAGACTTTGACATGAAATATTGCATTGGAACAGGAGCGTATGGGAGTGTTTACAAGGCACAATTACCAAGTGGCAAGGTTGTTGCCTTGAAAAAACTCCATGGTTTTGAAGCAGAGGTCCCAGCTTTTGATGAAAGTTTCAAAAATGAAGTGAGGGTATTATCAGAAATAAAGCACCGACATATTGTGAAGCTTTACGGGTTCTGTTTGCACAAAAGAATCATGTTTTTGATCTATCAATACATGGATAGAGGAAGTTTGTTCTCAGTATTGTATGATGAAGTTGAAGCAAAGGAATTAGACTGGAGAAAGAGGGTTGACACTATTAAAGGGGTGGCACTTGCTCTGTCGTATCTTCATCATGATTGCACCCCTCCAATAGTTCATAGAGACATAGCTACCACAAATATCTTACTTAACTCAGAGTGGCAGCCTAGTGTCTCTGATTTTGGCACAGCACGACTCCTCAATCATGATTCATCCAATCGAACAATAGTTGCTGGAACCATTGGATATATAGCTCCAGAGCTTGCCTATACTATGGTTGTGAGTGAAAAGTGTGATGTTTACAGCTTCGGAGTAGTGGCACTTGAAACTTTAGTGGGAAGGCATCCTAAGGAAATATTGTCATCATTTCAGTCAGCAACAACTCATGGCATCACATTATGTGAAATATTGGACCAACGCCTCCCACAACCAAATATGACAATTTTACTTGACTTAGTTCGTGTTGCCATAGTAGCATTTGCATGCTTAAATCTCAATCCTGGTTCTCGACCAACAATGAAATGTGTGTCTCGATGTTTTCTTACTCAGCTAACACCATTAAGCATTCCCTTACATGAAATTTCATTGCAGCAGCTCACGAGTCAAGAACTCAAGCTTTATTTAGGATTGTGA 981 0.3935 MSTKNGDLFCIWNYDGNMAYEDIIRVTEDFDMKYCIGTGAYGSVYKAQLPSGKVVALKKLHGFEAEVPAFDESFKNEVRVLSEIKHRHIVKLYGFCLHKRIMFLIYQYMDRGSLFSVLYDEVEAKELDWRKRVDTIKGVALALSYLHHDCTPPIVHRDIATTNILLNSEWQPSVSDFGTARLLNHDSSNRTIVAGTIGYIAPELAYTMVVSEKCDVYSFGVVALETLVGRHPKEILSSFQSATTHGITLCEILDQRLPQPNMTILLDLVRVAIVAFACLNLNPGSRPTMKCVSRCFLTQLTPLSIPLHEISLQQLTSQELKLYLGL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00664 326 FunFam Leucine-rich repeat protein kinase family protein 1 108 - -
Rops8g00664 326 FunFam MDIS1-interacting receptor like kinase 2 109 302 - -
Rops8g00664 326 Gene3D Phosphorylase Kinase; domain 1 4 108 - -
Rops8g00664 326 SUPERFAMILY Protein kinase-like (PK-like) 16 294 IPR011009 -
Rops8g00664 326 Pfam Protein kinase domain 35 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00664 326 ProSitePatterns Tyrosine protein kinases specific active-site signature. 154 166 IPR008266 GO:0004672|GO:0006468
Rops8g00664 326 ProSiteProfiles Protein kinase domain profile. 30 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00664 326 ProSitePatterns Protein kinases ATP-binding region signature. 36 58 IPR017441 GO:0005524
Rops8g00664 326 Gene3D Transferase(Phosphotransferase) domain 1 109 302 - -
Rops8g00664 326 SMART tyrkin_6 30 296 IPR020635 GO:0004713|GO:0006468
Rops8g00664 326 PANTHER LEUCINE RICH REPEAT KINASE 2 3 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00664 Rops-Chr8 13083158 13086459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00664 2 202 Receptor kinase-like Gene Family AT4G08850 52.451 2.53e-69 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops8g00664 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00664 - - ccaj:109796569 553.903