Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00663 ATGATTGTGTTGGAGCTATCCAATGGGGTTGTTAAAGACATGGCAGCACCGAGGGTCCCTATTTCTTCATGGTGCAGCCCCTACATCCTTCCTACACAAGCTCCCACTTACCCCTACAACTCGTTGATACCAAGAGGTGGTGTAAAGGTGCCCAAGTTCTCCATCAACCCCTACATGGATCTCTTGCATTCCATGCAAGAAATGATTCATTCCCATCAATTGTTGGACGTGAGAAATGATTGGGATTGTCTTCATGAGCTTCTCGTATGCTACCTTGCTCTCAATCCCACATATACCCACAAGCATGTTGTTCGTGCTTTCACACACCTTGTTGTGGACCTTTGCTCACAAGCTGGAGACTTAAACATAGCTCTCTTTGCTGCCAAGGTTTGTGCGTCGAGACACCACAGCCAGCAGCATGAAGCCCCGTTGCCACTTCATTCTAAGCACAAGGATATGGACAACAAACCACATGATCATTCTGAAGCACCCAAACATGCACCTCATCCTACTCAAGTACCTAGATCTCTCTCTTATTTTCAGCATGATGAACGAGGTAGTGCTGGGCTGGTTGGTCGAAGCTCTGGTCAAAGGAAAGTTGGTGAGCGTGGATGGTGGAAGGACTCAAAGAATCAGCATAATGAAAGGACAAGGACAAGTCAAGTGCTGCCACTTGTTTCGTCGTCCGCGGGCATCGCATTAGAATAG 708 0.4746 MIVLELSNGVVKDMAAPRVPISSWCSPYILPTQAPTYPYNSLIPRGGVKVPKFSINPYMDLLHSMQEMIHSHQLLDVRNDWDCLHELLVCYLALNPTYTHKHVVRAFTHLVVDLCSQAGDLNIALFAAKVCASRHHSQQHEAPLPLHSKHKDMDNKPHDHSEAPKHAPHPTQVPRSLSYFQHDERGSAGLVGRSSGQRKVGERGWWKDSKNQHNERTRTSQVLPLVSSSAGIALE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00663 235 PANTHER OS03G0203000 PROTEIN 139 219 - -
Rops8g00663 235 MobiDBLite consensus disorder prediction 138 174 - -
Rops8g00663 235 ProSiteProfiles OVATE domain profile. 50 113 IPR006458 -
Rops8g00663 235 MobiDBLite consensus disorder prediction 200 215 - -
Rops8g00663 235 Pfam Transcriptional repressor, ovate 54 114 IPR006458 -
Rops8g00663 235 NCBIfam uncharacterized plant-specific domain TIGR01568 50 115 IPR006458 -
Rops8g00663 235 MobiDBLite consensus disorder prediction 186 235 - -
Rops8g00663 235 MobiDBLite consensus disorder prediction 138 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00663 Rops-Chr8 13072095 13072802 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g00663 Ovate 1.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00663 - - mtr:25485200 123.635