Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00662 ATGATTGTGTTGGAGCTATCCAATGGGGTTGTTAAAGACATGGCAGCACCGAGGGTCCCTGTTTCTTCATGGTGCAGCCCTTACATTCTTCCTACACAAACTCTCACTTGCCCCTGCAACTCGTTGATACCAAGAGGTGGTGTAAGAGTGCCCAAGTTCTCCATCAACCCCTACGTGGATCTCTTGCATTCCATGCAAGAAATGATTCATTCCCATCAATTGTTGGACGTGAGAAATGATTGGGATTGTCTTCATGAGCTTCTCGTATGCTACCTTGCTCTCAATCCCACACATACCCACAAGCATGTTGTTCGTGCTTTCACACACCTTGTTGTGGACCTTTGCTCACAAGCTGGAGACTTAAACATAGCTCTCTTTGTTGCCAAGGTTTGTGCGTCGAGACACCACAGCCGGCAGCATGAAGCCCTGTTGCCACTTCATTCTAAGCACAAGGATATGGACAACAAACCACATAATCATTCTGAAGCACCCAAACATGCACCTCATCCTACTCAAGTACCTAGATCTCTCTCTTATTTTCAGCATGATGAACGAGGTAGTACTGGGCTGGTTGGTCGAAGCTCTGGTCAAAGGAAAACTGGTGAGCGTGGATGGTGGAAGGACTCAAAGAATCAGCATAATGAAAGGACAAGGACAAGTCAAGTGCTGCCACTTGTTTCGTCGTCCGCGGGCATCACATTAGAATAG 708 0.4703 MIVLELSNGVVKDMAAPRVPVSSWCSPYILPTQTLTCPCNSLIPRGGVRVPKFSINPYVDLLHSMQEMIHSHQLLDVRNDWDCLHELLVCYLALNPTHTHKHVVRAFTHLVVDLCSQAGDLNIALFVAKVCASRHHSRQHEALLPLHSKHKDMDNKPHNHSEAPKHAPHPTQVPRSLSYFQHDERGSTGLVGRSSGQRKTGERGWWKDSKNQHNERTRTSQVLPLVSSSAGITLE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00662 235 MobiDBLite consensus disorder prediction 143 165 - -
Rops8g00662 235 MobiDBLite consensus disorder prediction 143 235 - -
Rops8g00662 235 MobiDBLite consensus disorder prediction 216 235 - -
Rops8g00662 235 MobiDBLite consensus disorder prediction 174 195 - -
Rops8g00662 235 NCBIfam uncharacterized plant-specific domain TIGR01568 51 115 IPR006458 -
Rops8g00662 235 MobiDBLite consensus disorder prediction 200 215 - -
Rops8g00662 235 Pfam Transcriptional repressor, ovate 54 114 IPR006458 -
Rops8g00662 235 PANTHER OS03G0203000 PROTEIN 146 219 - -
Rops8g00662 235 ProSiteProfiles OVATE domain profile. 50 113 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00662 Rops-Chr8 13054343 13055050 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g00662 Ovate 3.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00662 - - mtr:25485200 128.642