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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Rops8g00649
ATGGGAAGATCACCATGTTGTGATAAAGTTGGTTTAAAGAAAGGACCATGGACTCCTGAGGAAGATCAAAAGCTCTTGGCTTATATTGAAGAACATGGTCATGGAAGCTGGCGTGCTTTACCAGCAAAAGCTGGACTTCAAAGGTGTGGAAAAAGTTGTAGACTGAGATGGAGTAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTCAGTTTGCAAGAAGAACAAACCATCATTCAACTTCATGCACTCTTAGGGAACAGGTGGTCAGCAATAGCTACACATTTGCCAAAGAGAACAGATAATGAGATAAAGAACTATTGGAACACTCATCTGAAGAAAAGGTTAACAAAAATGGGAATAGACCCGGTTACCCACAAGCCCAAGAACGATGCCCTTCTCTCTAGTGAAGGCCATTCCAAAAATGCTGCAAACCTTAGCCACATGGCTCAATGGGAGAGTGCTAGGCTCGAAGCTGAAGCAAGATTGGTCAGAGAATCAAAACTACGTTCACATTCATTGCAACATCACCTTGGTAGTTCTTCATTTCCAACCTCATCTTCAAACCCGTTACTTAACAAACCAGATTCAATGAAGGTTTGGAACAGTGGTGGTTGCTTAAAATCTAATGAAGGAAATGGTAGTATTGCAACAACTGGGATCAGCTGTGACTTTGAATCACCAACTTCTTCACTATCTTCTTTCTCAGAGAATAATAATAATAATAACATGCCACTAATTAGTAGACTTGGAGAAAACACTGGCCTTATGATTGAGTTTGTGGGCACTTCAGGTTCTTCTGAGAGAGGAATTGTGAAAGAAGAAGGTGAACAAGAGTGGAAAAGTTATGAAAACTCAACCAATCTACCAGAATACAAAGATGGCATGGAGAATTCAATGCCTTTTACATCTACCCTTCATGAGTTGACAATGACAATGGAAACCACGTGGGGTTCTGAGTCTCTTAGGATCAATAGTACTAGTAGTGCACATGTTCCTGTTGCTGAGGAAGGATTCACCAATCTCTTGCTGAATGCTAATTCCGATGACCGGAGTTTGTCACCGGAGGGTGGTGGAGAGTCTAATACTTGTGATGCAAGTGGTGGTGGAAGTGGCAGTGACTTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTGGTCGATTCTTCCCCTTCTGATTCCCCCATGTTCTGA
1203
0.414
MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWSNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLTKMGIDPVTHKPKNDALLSSEGHSKNAANLSHMAQWESARLEAEARLVRESKLRSHSLQHHLGSSSFPTSSSNPLLNKPDSMKVWNSGGCLKSNEGNGSIATTGISCDFESPTSSLSSFSENNNNNNMPLISRLGENTGLMIEFVGTSGSSERGIVKEEGEQEWKSYENSTNLPEYKDGMENSMPFTSTLHELTMTMETTWGSESLRINSTSSAHVPVAEEGFTNLLLNANSDDRSLSPEGGGESNTCDASGGGSGSDFYEDNKNYWNSILNLVDSSPSDSPMF*
401
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Rops8g00649
400
CDD
SANT
69
112
IPR001005
-
Rops8g00649
400
ProSiteProfiles
Myb-like domain profile.
62
112
IPR001005
-
Rops8g00649
400
SMART
sant
13
63
IPR001005
-
Rops8g00649
400
SMART
sant
66
114
IPR001005
-
Rops8g00649
400
MobiDBLite
consensus disorder prediction
348
372
-
-
Rops8g00649
400
SUPERFAMILY
Homeodomain-like
11
108
IPR009057
-
Rops8g00649
400
CDD
SANT
16
61
IPR001005
-
Rops8g00649
400
FunFam
Transcription factor RAX3
7
67
-
-
Rops8g00649
400
Gene3D
-
69
116
-
-
Rops8g00649
400
MobiDBLite
consensus disorder prediction
348
369
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Rops8g00649
Rops-Chr8
12807839
12810968
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Rops8g00649
1
400
MYB Transcription Factor Family
AT3G01140
54.878
8.53e-127
367
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MYB
Rops8g00649
Myb_DNA-binding
2.1e-15
CL0123
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Rops8g00649
K09422
-
cave:132181307
531.946
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