Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00622 ATGCTAGGTCCCAGACATACAAAGAGTAGAAACTTTTGCTTTCTACAAATTCTCGCGGGAACAGGTTGTGTGACAAAACACAAATTAACCACCAATCTGGCTTCTGAGCTTTCAAGGAAGTTCAGCCTTGATGGAAATGTTGAATTACAGGTTGGAGTGGAGGGAGTTATATGTGAAAGGCAATGGTTTGAAAACAATGGTGACAACCTTCACATCAAGTTACCAGCAAAATATAAGCTAACATACATAGATATGATTCGTGGGATTCCAAGAGCCTCTGATAACTCGGGCATTGTGAATATTGATTCAGAGCGAAAGCCTTCTCTCATTTGGAGTTCATATGCCCCTGATATATACAATAATATTCGTGTCAGAGAGTGTGAAAAGAGACCGTTAGCTGATTACATGGACAAGTTGCAGCAAGATATCAAGCCAAACATGCAGGCAATTCTGGTTGATTGGCTAGTGGAGATAAGGAAAACAAGTTGA 489 0.4029 MLGPRHTKSRNFCFLQILAGTGCVTKHKLTTNLASELSRKFSLDGNVELQVGVEGVICERQWFENNGDNLHIKLPAKYKLTYIDMIRGIPRASDNSGIVNIDSERKPSLIWSSYAPDIYNNIRVRECEKRPLADYMDKLQQDIKPNMQAILVDWLVEIRKTS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00622 162 Pfam Cyclin, N-terminal domain 117 160 IPR006671 -
Rops8g00622 162 SUPERFAMILY Cyclin-like 109 158 IPR036915 -
Rops8g00622 162 Gene3D - 117 130 - -
Rops8g00622 162 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Rops8g00622 162 Gene3D - 131 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00622 Rops-Chr8 12537320 12543672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00622 20 158 Core Cell Cycle Gene Families AT1G15570 32.215 2.48e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00622 K06627 - gmx:100777132 101.679