Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00594 ATGCCCATTGACTTGCCCGGAACACCCCTCAACAGAGCAATCAAGGCCTCCAAATTCATTAGGGAGGAGCTGTTGAAGATCATCAAGCAAAGGAAGGTGGATTTGGGTAATGCCTCACCAACACAAGAGATATTGTCTGACATGTTATTGACATGTGATGAAAATGGACAATATATGACTGAACATGATATTGCAGACAAGATTCTTGGCCTATTGATTGGTGGCCATGACACCGCAAGTACCACTTGCACTTTCACTGTCAAATACCTTGCCGAGCTCCCTCAAAATATTTATCAACAAGTCTATCAAGAGCAAATAGGAATTGCAAAATCCAAATTTCCACGGGAGCTTTTAAATTGGCATGACGTCGAGAAGATGAAATACTCGTGGAATGTAGCTTGTGAAGTTATGAGACTTGCTCCTCCAGTTCAAGGAACTTTTAGGGAAGCCATCAATGACTTTGTTTTCAAAGGATTCTCTATTCCAAAAGGTTGGAAGTTATTTTGGAGTCCAAATTCAACACATAAGAATCCAGATTACTTTCCAGAACCAACAAAATTTGATCCGAGTAGATTCGAAGGAAATGGACCAACTTCATACACTTATGTACCATTCGGTGGAGGACCGAGGATGTGCCCCGGAAAAGAGTATGCACGAATGGAAATATTGATTTTCATGCACCACCTAGTGAAGAGGTTCAAGTGGGAAAAGATGATTCTTGATGAGAAGACTGTGATTAATCACATGCCTATTCCTGTCAAAGGCCTTCCTATTTGTCTTTATCCTCACCAAGCTTGA 798 0.411 MPIDLPGTPLNRAIKASKFIREELLKIIKQRKVDLGNASPTQEILSDMLLTCDENGQYMTEHDIADKILGLLIGGHDTASTTCTFTVKYLAELPQNIYQQVYQEQIGIAKSKFPRELLNWHDVEKMKYSWNVACEVMRLAPPVQGTFREAINDFVFKGFSIPKGWKLFWSPNSTHKNPDYFPEPTKFDPSRFEGNGPTSYTYVPFGGGPRMCPGKEYARMEILIFMHHLVKRFKWEKMILDEKTVINHMPIPVKGLPICLYPHQA* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00594 265 PRINTS P450 superfamily signature 74 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS P450 superfamily signature 203 212 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS P450 superfamily signature 131 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PANTHER CYTOCHROME P450 26 1 241 - -
Rops8g00594 265 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 205 214 IPR017972 GO:0005506|GO:0016705
Rops8g00594 265 SUPERFAMILY Cytochrome P450 4 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS E-class P450 group I signature 63 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS E-class P450 group I signature 212 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS E-class P450 group I signature 202 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 PRINTS E-class P450 group I signature 170 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 Pfam Cytochrome P450 8 245 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00594 265 Gene3D Cytochrome P450 1 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00594 Rops-Chr8 12177161 12180586 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00594 1 167 Cytochrome P450 AT5G36110 59.763 3.25e-59 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00594 K20667 - ag:WEU75100 445.662