Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00588 ATGGACCCCAACTTGCCACCGGGAAGGATGGGGTTTCCAGTGATCGGAGAGAGCCTCGCGTTCCTGTCCTCGGGATGGAAAGGTCATCCGGAGAAGTACTTCTTTGAACGCATCACCAAGTACTCTTCCCATGTCTTCAAGACCTCAATCTTTGGCGAGCCCACGATTATGTTCTGTGGATCCACATGCAACAAGTTCTTGTTTGCTAATGAGAACAAGCTTGTGATCGCATGGTGGCCTGACAATGTCTACAAGATATTCCCAACGGGGCTTCAGACGAGTTCTAAGGAAGAAGCTAAAAGACTGAGATACATGCTTCCTCAATTCCTTAACCCCAAAGCTCTCCAACGTTATGTTGGTATTATGGACACCATTGCCCAAAGGCACTTTGCTTCCCACTGGGAAAACAAAACTGAAGTCACCGTATTCCCCTTGGCCAAGAGGTATACCTTCTGGTTAGCTTGTCGCTTGTTCATGAGCATTGAAGATCCAAACAATATAGCAAAATTAATGGAACCTTTCAATCAAGTGGCCTCAGGAATCATATCAATGCCCATTGACTTTCCTGGAACACCCCTAAACAGAGCAATCAAGGCCTCCAAGTTCATTAGGGAGGAGCTGTTGAAGATCATCAAACAGAGGAAGGTGGATTTGGCTGATGGGAAGGCTTCACCAACCCAAGACATATTATCTCACATGTTATTAACATGTGATGAGAATGGACAGTATCTGACTGAACATTATATTGCAGACAAGATTTTTGGCCTATTGATTGGTGGCCATGACACTGCAAGTTCCACTTGCACTTTCGTTGTCAAATACCTTGCCGAGCTCCCTCAAAATATTTATCAACAAGTCTATCAGGAGCAAATGGAAATTGCAAATTCGAAATCTTCAGGAGAATCGTTAACTTGGCGTGATATTGAGAAGATGAAATATTCATGGAATGTAGCATGTGAAGTAATGAGACTTGCCCCTCCACTTCCAGGAGCTTTTCGGGAAGTCCTTAACGACTTTGTTTTCAATGGATTCTCAATTCCAAAAGGATGGAAGTTGTATTGGAGTGCAAGTTTAACACATAAGAATCCAGACTGCTTTCCAGAGCCGGAGAAATTCGATCCAAGTAGATTCGAAGGAAATGGACCAGCTCCTTACACTTATGTACCATTCGGGGGAGGACCAAGGATGTGTCCTGGAAAAGAGTATGCACGAATGGAAATACTGGTTTTCATGCATAACTTAGTGAAGAGGTTCAAGTGGAAAAAGGTGATTCCTCATGAGAAGATTGTGGTTAATCCCTTGCCTGTTCCTGTCAAAGGCCTTCCTGTTCGTCTTTATCCTCACCAAGCTTGA 1353 0.439 MDPNLPPGRMGFPVIGESLAFLSSGWKGHPEKYFFERITKYSSHVFKTSIFGEPTIMFCGSTCNKFLFANENKLVIAWWPDNVYKIFPTGLQTSSKEEAKRLRYMLPQFLNPKALQRYVGIMDTIAQRHFASHWENKTEVTVFPLAKRYTFWLACRLFMSIEDPNNIAKLMEPFNQVASGIISMPIDFPGTPLNRAIKASKFIREELLKIIKQRKVDLADGKASPTQDILSHMLLTCDENGQYLTEHYIADKIFGLLIGGHDTASSTCTFVVKYLAELPQNIYQQVYQEQMEIANSKSSGESLTWRDIEKMKYSWNVACEVMRLAPPLPGAFREVLNDFVFNGFSIPKGWKLYWSASLTHKNPDCFPEPEKFDPSRFEGNGPAPYTYVPFGGGPRMCPGKEYARMEILVFMHNLVKRFKWKKVIPHEKIVVNPLPVPVKGLPVRLYPHQA* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00588 450 SUPERFAMILY Cytochrome P450 3 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS E-class P450 group I signature 248 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS E-class P450 group I signature 355 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS E-class P450 group I signature 387 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS E-class P450 group I signature 397 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 FunFam Taxadiene 5-alpha hydroxylase 1 448 - -
Rops8g00588 450 PANTHER CYTOCHROME P450 26 5 436 - -
Rops8g00588 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 390 399 IPR017972 GO:0005506|GO:0016705
Rops8g00588 450 Gene3D Cytochrome P450 1 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 CDD CYP90-like 37 447 - -
Rops8g00588 450 Pfam Cytochrome P450 6 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS P450 superfamily signature 388 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS P450 superfamily signature 259 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00588 450 PRINTS P450 superfamily signature 397 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00588 Rops-Chr8 12004198 12011574 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00588 3 352 Cytochrome P450 AT5G36110 59.207 1.18e-148 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00588 K20667 - tcc:18589551 753.051