Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00581 ATGCAGAGGCTTGGATACAACAGGAATGCCAAAAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTCAAGGAAAATAACAAGCAAAGGCATGAAGATAGCAAGACATGTCCCTATTTTCATGAGCTTGATGCTCTATGCAAAGAAAAGAGCAAAACACAAAACTTCTTTGGTGTTTCATTCCACAACATGAGGCCAAATGAAATGATGGAACCATTAATGGTGCAACCAGAGCAACAATGGAGGTCGTGGAGCGAAGTGGATGTCGTTGATAAGTGA 291 0.4055 MQRLGYNRNAKRCKEKWENINKYFKKVKENNKQRHEDSKTCPYFHELDALCKEKSKTQNFFGVSFHNMRPNEMMEPLMVQPEQQWRSWSEVDVVDK* 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00581 96 Gene3D - 1 26 - -
Rops8g00581 96 Pfam Myb/SANT-like DNA-binding domain 1 50 IPR044822 -
Rops8g00581 96 PANTHER FI21293P1 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00581 Rops-Chr8 11867137 11867427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00581 1 85 Trihelix Transcription Factor Family AT1G76880 59.184 5.07e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Rops8g00581 Myb_DNA-bind_4 5.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00581 - - gmx:100780577 164.466