Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00580 ATGGGGTTTCCGGTGATCGGAGAGAGCCTCGCCTTCCTATCCTCGGGATGGAAAGGCCATCCTGAGAAGTTCGTCTATGAACGCATCACCAAGTACACTTCTCATGTCTTCAAAACCTCGATCTTTGGGCAGCCCACAGTTATGTTCTGTGGATCCGCATACAACAAGTTATTGTTTTCTAACGAGAACAAGCTCGTGAGGCCATGGTGGCCTGAGAACTTCAACAAGGTATTCCCAACGACGCTTCAAACCAACTCTAGTGAAGAAGGTAAGAAGTTAAGACATATGCTCCCTCAGTTCCTTAGCCCCAAAGCTCTTCAACGTTATGTTGGTATTAAGGACTCCATTGCCCGAAGACACTTTGCTTCACACTGGGACAACAAGACTGAGGTCACCGTATTCCCCTTGGCCAAGAGTTATACATTCTGTTTGGCTTGCCGCTTGTTCGTGAGCATTGAGGATCCCAACCTCATAGCAAATTTTGCGGAACCTTTCAAATTAGTAGGCTCAGGACTCATGTCAATGCCCATTGACTTGCCAGGAACACCATTAAACCGAGCAATAAAGGCTTCAAAGTTCATTAAGGAGGAGCTAATGAAGATCATCAAGCAAAGGAAGGTGGATTTGGCTGATGGGAAGGCCTCACCAACCCAAGACATATTATCTCACATGTTATTAACATGTGATGAGAATGGACAGTATCTGACTGAACATTATATTGCAGACAAGATTTTTGGCCTCTTGATTGGTGACCATGACACTGCAAGTTCTGCTTGCACTTTCATTGTCAAATACCTTGCCGAGCTCCCTCCCAATTTTTATCAGCGAGTCTATCAGGAGCAAATGGAAATTGCAAAATCTAAAGCTCCAAGAGAGTTGTTAAATTGGCATGACATTGAGAAGATGAAATATTCATGGAATGTTGCGAGTGAAGTAATGAGACTTGTCCCTCCACTTCCAGGAGCTTTTCGAGAAGTCCTCAATGACTTTATCCTTAATGGATTCTCAATTCCAAAAGGTTGGAAGTTGTATTGGAGTGCAAATTCAACACATAAAAATCCAGAGCTATTTCCAGAACCAGAGAAATTTGACCCAAGCAGATACGAAGGAAATGGGCCAGCTCCTTACACTTTTGTACCATTTGGTGGAGGGCCAAGGATGTGTCCCGGAAAAGAGTACGCACGAATAGAAATAATGGTTTTCATTCACAACATAGTGAAGAGGTTCAAGTGGGAAAATGTGATTCCTAATGAGAAAATTGTGGTTAATCCCTTACCTGTTCCTGCCAATGGACTTCCTATTCGTCTTTATCCTCATTAA 1320 0.4326 MGFPVIGESLAFLSSGWKGHPEKFVYERITKYTSHVFKTSIFGQPTVMFCGSAYNKLLFSNENKLVRPWWPENFNKVFPTTLQTNSSEEGKKLRHMLPQFLSPKALQRYVGIKDSIARRHFASHWDNKTEVTVFPLAKSYTFCLACRLFVSIEDPNLIANFAEPFKLVGSGLMSMPIDLPGTPLNRAIKASKFIKEELMKIIKQRKVDLADGKASPTQDILSHMLLTCDENGQYLTEHYIADKIFGLLIGDHDTASSACTFIVKYLAELPPNFYQRVYQEQMEIAKSKAPRELLNWHDIEKMKYSWNVASEVMRLVPPLPGAFREVLNDFILNGFSIPKGWKLYWSANSTHKNPELFPEPEKFDPSRYEGNGPAPYTFVPFGGGPRMCPGKEYARIEIMVFIHNIVKRFKWENVIPNEKIVVNPLPVPANGLPIRLYPH* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00580 439 Gene3D Cytochrome P450 1 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS P450 superfamily signature 379 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS P450 superfamily signature 250 267 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 CDD CYP90-like 28 438 - -
Rops8g00580 439 PANTHER CYTOCHROME P450 26 1 426 - -
Rops8g00580 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 381 390 IPR017972 GO:0005506|GO:0016705
Rops8g00580 439 SUPERFAMILY Cytochrome P450 2 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 FunFam Taxadiene 5-alpha hydroxylase 1 439 - -
Rops8g00580 439 Pfam Cytochrome P450 4 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS E-class P450 group I signature 378 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS E-class P450 group I signature 388 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g00580 439 PRINTS E-class P450 group I signature 346 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00580 Rops-Chr8 11810600 11816568 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00580 2 348 Cytochrome P450 AT5G36110 54.857 3.89e-133 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00580 K20667 - gmx:100801007 709.909