Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00571 ATGGCTGTAGAGGAGTCTGAGCATGTCATTCCTGAGCTTGAGAGGGAAGAAAACTTAATTGCTGCAGCAAGGCATATTGTGAAGGCATTAGGGTCAACTAAGAACCTTACTAATGATGCCAAGAAAATTCTTGCAGATCTTGGCACACAGTTGTCTTCCATGAACATACCAAGTGAGAAGGAGGAGGGGAAGCAAGGGCAAAGGGAGGATGATACTGATGGTGATGATGATGATGAGGGTGTTAGTGCTATTGAAGAAAGGCTTAGTGTGATTCAGGAGAAAATAATGAGATGGGAGGAAGATCAGTCCATGATTTGGGATTCTGGCCCTGAAGAAGCATCTGAATATCTGAATGCAGCAAATGAAGCCCGGAGATTGATTGAGAAGCTGAAGAGTGTGCATTTGAATAAAGAGGATTTAGAGTATAAGTTTATGCAAAGGGCTTATAGTGTTCTTCAAACAGCTATGGAAAAGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAATAGGCAACCTTTTGAACCTGAATATGTCTCTTTTAGGTCCAATGAGGAAGATCCTGCTGATGAGAATTCTATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCCTCTGAGGAGCATATCATTGATTTGGTTCATCCAGCAGTGATCCCTGATCTCAGGTGTATTGCAAACTTATTGTTTGCTTCTAATTATGTCCAGGAATGTTCTCATGCTTATACCATTGTCCGGAGGGATGCCTTAGATGAGTGTCTCTTCATCCTTGAAATGGAAAGGCTCAGTATTGAGGATGTCTTGAAAATGGAGTGGGGTACTTTGAATTCAAAGATCAAAAGATGGATTTGGGCCGTGAAAATCTTTGTTAGGGTGTATCTTGCAAGTGAGAAGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTGAGTCAAGGTTGTTTTGTTGATGCATCTAAGGCTTCAATGTTGCAGCTTCTGAATTTTGGTGAAGCCATGTCTATTGGCCCTCACCAACCTGAGAAATTGTTTCGTATTCTTGACATGTATGAGGTTCTAGCAGAACTCATGCCAGACATTGATGCTTTGTATTCAGATGAGGTTGGTTCCTGTGTTAAGATTGAATGCCATGAGGTTCTGAAGAGATTAGGTGATTGTGTAAGGGCAACATTCATTGAATTTGAAAATGCCATTGCGTCAAATGCATCAACAACACCTTTTGTAGGTGGTGGGATACATCCTTTGACCAGGTATGTTATGAATTATCTTAGGACTGTCACTGACTACAGTGAAACACTTAATCTGCTTCTGAAGGACCAAGAAGAAGATGATGCCATTTCATTGTCACCTGATATGAGCCCTGGTACAGAAGAAGATAGCAAAAGCCAAGGATCTCCAAGTAGAATTTCCTCAATGGCCCTCCACTTCAGATCAGTTGCTTCAACCTTGGAAGGCAACCTTGAAGACAAGGCCAAGTTATACAAAGAAACTTCCCTGCAGCACTTGTTCTTAATGAACAATCTACATTATATGGCTGAAAAGGTTAAAGGGTCTGAACTTAGGCTCATATATGGAGATGAATGGATTCGAAAGCGCAATTGGAAGTTTCAGCAACATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAATTCATGTTCCGGGTACAAATTCCATCTCAAAAGGTCTTCTTAAGGAGAAGTTAAGAAGCTTCTACCTTGGTTTTGAGGACGTTTATAGGATCCAAACAGCTTGGCTTATCCCAGATGTTCAGCTTCGTGAAGACTTGAGGATTTCTATATCAGTCAAAGTAATCCAAGCTTATAGGACATTTGTTGGAAGGAATAATAGTCACATAAGTGACAAAAACATTAAATATACTGCTGATGATTTAGAAAATTACCTTTTGGATTTCTTTGAAGGATCTCTAAAGTGTTTGCAAAATCCTCATAGGAGGTGA 2016 0.4058 MAVEESEHVIPELEREENLIAAARHIVKALGSTKNLTNDAKKILADLGTQLSSMNIPSEKEEGKQGQREDDTDGDDDDEGVSAIEERLSVIQEKIMRWEEDQSMIWDSGPEEASEYLNAANEARRLIEKLKSVHLNKEDLEYKFMQRAYSVLQTAMEKLEEEFRNLLIQNRQPFEPEYVSFRSNEEDPADENSIVSLGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYVQECSHAYTIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASEKWLSDQIFGEGEPVSQGCFVDASKASMLQLLNFGEAMSIGPHQPEKLFRILDMYEVLAELMPDIDALYSDEVGSCVKIECHEVLKRLGDCVRATFIEFENAIASNASTTPFVGGGIHPLTRYVMNYLRTVTDYSETLNLLLKDQEEDDAISLSPDMSPGTEEDSKSQGSPSRISSMALHFRSVASTLEGNLEDKAKLYKETSLQHLFLMNNLHYMAEKVKGSELRLIYGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGIHVPGTNSISKGLLKEKLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISVKVIQAYRTFVGRNNSHISDKNIKYTADDLENYLLDFFEGSLKCLQNPHRR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00571 671 Coils Coil 81 101 - -
Rops8g00571 671 Coils Coil 113 133 - -
Rops8g00571 671 MobiDBLite consensus disorder prediction 463 478 - -
Rops8g00571 671 PANTHER EXOCYST COMPLEX PROTEIN EXO70 80 660 IPR004140 GO:0000145|GO:0006887
Rops8g00571 671 MobiDBLite consensus disorder prediction 51 81 - -
Rops8g00571 671 Coils Coil 142 169 - -
Rops8g00571 671 MobiDBLite consensus disorder prediction 456 478 - -
Rops8g00571 671 Pfam Exo70 exocyst complex subunit 289 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops8g00571 671 SUPERFAMILY Cullin repeat-like 102 659 IPR016159 -
Rops8g00571 671 Gene3D Exocyst complex component Exo70 95 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00571 Rops-Chr8 11694331 11697014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00571 12 671 EXO70 exocyst subunit family AT3G29400 49.331 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00571 K07195 - gmx:100799102 1175.61