Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00558 ATGGCTTCAATAAATGGTCGTAAAGCAAGTGAGATCTTTCAAGGCCAAGCTCTCTTGTATAGACACATATATGCCTTAAGAGACTCCATGTGTCTAAAATGGATTGTTGAGCTAGGTATACCAGATATAATCCACAACCATGGCCAACCCATTACTCTTGCAAAGTTGGTGTCAATCTTGCAAGTTCCACCAACAAAAGTTGGTAACGTGCAACGTCTCATGTGCTACCTGGAACACAATAGATTCTTTGAGATAGTAAGAATCAATGACAACCAAGAAGAAGAGGAAGCATATACTCTCACTGCTACATCAGAGCTCCTTGTCAAAGGCATTGACCTCTATTTAGCTCCAATGGTTGAGTGTGTTCTTGAGCCAACTTTTTCAGATTCATACCACCTGTTGAGGAAATGGATTTATGAGGAAGATCTCACACTATTTGGTGTCTCCGTAGGATCCCATTTTTGGGACTTTCTGAACAAAAACCCTGATTATAATAGGTCATTAGATGAGGCAATGGCCAATGATTCTCAAATGATAAACTTGGTATTGAGGGATTGCAATTCTGTATTTGAGGGAGTGGAATCCATTGTGGATGTAGGTGGTGGAACTGGAACCACAACCAAGATTCTGTGTCAGACATTTCCTAAGTTGAAATGTATAGTGTTTGATCATCCACAAGTTATAGAAAACTTGTCAGGAAGCAACAATTTGACTTATATTGGTGGGGACATGTTCAATTCTATTCTTAAGGCTGATGCAATTCTACTTAAGATGATTATGCATGATTGGACTAACAATGATTGTAGAAAGATATTGGAAAAATGCAAAGAAGCTATTTCAAGTAATGGGGAAAGAGGGAAAGTAATTATCATAGATGTTGTGGTAAATGAAAAGCAAGATGAGCATGAACTCACTGGAACAAAGCTCCTTCTAGATGTAAACATAGCAGGTCTTAATGGAAAAGAGAGAAACGAAGAAGAATGGAAGAAACTCTTCACGGAAACAGGCTTCATTGAGTACAAAACATCTCCATTGACTGGACTTTTGTCTCTTATTGATGTCTATTCTTAA 1071 0.3819 MASINGRKASEIFQGQALLYRHIYALRDSMCLKWIVELGIPDIIHNHGQPITLAKLVSILQVPPTKVGNVQRLMCYLEHNRFFEIVRINDNQEEEEAYTLTATSELLVKGIDLYLAPMVECVLEPTFSDSYHLLRKWIYEEDLTLFGVSVGSHFWDFLNKNPDYNRSLDEAMANDSQMINLVLRDCNSVFEGVESIVDVGGGTGTTTKILCQTFPKLKCIVFDHPQVIENLSGSNNLTYIGGDMFNSILKADAILLKMIMHDWTNNDCRKILEKCKEAISSNGERGKVIIIDVVVNEKQDEHELTGTKLLLDVNIAGLNGKERNEEEWKKLFTETGFIEYKTSPLTGLLSLIDVYS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00558 356 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Rops8g00558 356 PANTHER O-METHYLTRANSFERASE 15 341 IPR016461 GO:0008168
Rops8g00558 356 FunFam O-methyltransferase ZRP4 109 356 - -
Rops8g00558 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Rops8g00558 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 352 IPR029063 -
Rops8g00558 356 Gene3D - 1 107 IPR036388 -
Rops8g00558 356 Pfam O-methyltransferase domain 132 337 IPR001077 GO:0008171
Rops8g00558 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 110 IPR036390 -
Rops8g00558 356 FunFam Coniferyl alcohol 9-O-methyltransferase 2 107 - -
Rops8g00558 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Rops8g00558 356 Gene3D Vaccinia Virus protein VP39 109 356 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00558 Rops-Chr8 11535557 11536760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00558 30 337 Monolignol Biosynthesis Gene Families AT5G54160 29.524 3.79e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00558 K22588 K13262 ag:AAC49926 514.998