Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00553 ATGGCTTCTCCCAAGAGCTCCATCAAAATCCATGAGCATTGCCATGTTGCTCCTCCTCCATCTTCAACCCAAACATCCCTCCCTCTCACCTTCTTTGACTTGTTTTGGCTCAGGTTTCATCCAGTTGAACGCATCTTCTTCTATTCCCTTCCTCTTCCTCATTCAGACCCATCTTTTTTCTTAGACAAAGTGGTTCCAAAACTCAAATCCTCACTCTCTCTAACCCTCCAACACTTCCTCCCTTTAGCTGGTAAGATAGTTTGGCCTTGTGATTCTCAAAAACCCATCATTCAATTCAACCCTGGTGATGGAATCTCCTTAGTCCTAGCAGAATCTGATGCAGATTTCAATCAAATATTGAAGCACAATTCACCCCGTGAAGCTATAGAATCTCGTAATTTGGTACCCCACTTGGAATCATCAGATTCTTTTGCATCTGTTATCTCCTTGCAGATAACACTGTTTCCAAATAGTGGTTTTTGCATTGGTATCAGCGCACACCATGCTGTTCTTGATGGAAAATCTTCAACTATGTTCATCAAGGCTTGGGCTTCTATGTGTAAATCTAGTGAAAAGTCACCATCTTTGGTGCCAGAGTTAGAGCCTTTCTTTGACAGGGAATTGATCAAAGATCCAAATGGCCTTTGCAACTTGTTTGTAAATAGCTGGAAAGAAATCTCATCCAAATTTGACCCTACTAATAACAACAACTCACGAAGCTTGAAGATTTTGTTCGATGCATCTCCTCAATCAATCATGGATCACTCATTTCGATCCACGTTTGAGCTCACACGTGGAGATTTAGATAAGATGAAGAAAAGGGTGTTATCCAAGTGGGACAAGGTGGAAGAAGCACAAACAATGGATTCTCCAAAGCCAACTACTTTATCAACATTTGTTCTTACATGTGCTTACGTGTCTTGCTGCATTGCTAAGGCCATTCAAGAAGAAGAAAAGGATAAGCAGAAATTTGCATTTGGATTCACTGGGGATTGCAGGGCTAGGTTAGATCCTCCAATCCCAGAAAACTATTTTGGCAATTGTGTGTCTTCACATTTGGTGGATACAGAACATGATGATTTTACAAAGGAAGATGGGGTGGTCATTGTTGCTAAGAAGATTCATGGTAAAATAAAAATGTTGGATAAAGGAGTTCTTGATGGAATAGAGACAGTGATGTTTAGATATATGTCTATGATGAGTGAGGGAGTTAAAGGAATTGGAGTTGCTGGTTCAACAAGGTTTGGTGTTTATGGTACTGATTTTGGTTGGGGAAGGCCGGCAAAGGTGGAAATAGTGTCGGTAGATAGTGCCAGCATTGGTCTGACAGAAAGCAAGGATGGGAAAGGTGGTGTTGAAGTTGGGCTAGTTCTTAATAAGCATGTGATGCCTCTTTTTCGTACCATTTTCCATGAAGGGCTTTCCTTTGATTGA 1434 0.41 MASPKSSIKIHEHCHVAPPPSSTQTSLPLTFFDLFWLRFHPVERIFFYSLPLPHSDPSFFLDKVVPKLKSSLSLTLQHFLPLAGKIVWPCDSQKPIIQFNPGDGISLVLAESDADFNQILKHNSPREAIESRNLVPHLESSDSFASVISLQITLFPNSGFCIGISAHHAVLDGKSSTMFIKAWASMCKSSEKSPSLVPELEPFFDRELIKDPNGLCNLFVNSWKEISSKFDPTNNNNSRSLKILFDASPQSIMDHSFRSTFELTRGDLDKMKKRVLSKWDKVEEAQTMDSPKPTTLSTFVLTCAYVSCCIAKAIQEEEKDKQKFAFGFTGDCRARLDPPIPENYFGNCVSSHLVDTEHDDFTKEDGVVIVAKKIHGKIKMLDKGVLDGIETVMFRYMSMMSEGVKGIGVAGSTRFGVYGTDFGWGRPAKVEIVSVDSASIGLTESKDGKGGVEVGLVLNKHVMPLFRTIFHEGLSFD* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00553 477 SUPERFAMILY CoA-dependent acyltransferases 295 436 - -
Rops8g00553 477 PANTHER - 8 476 - -
Rops8g00553 477 Pfam Transferase family 8 468 - -
Rops8g00553 477 Gene3D - 7 235 IPR023213 -
Rops8g00553 477 Gene3D - 254 477 IPR023213 -
Rops8g00553 477 FunFam Phenolic glucoside malonyltransferase 1 8 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00553 Rops-Chr8 11503531 11505457 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00553 8 472 Monolignol Biosynthesis Gene Families AT5G48930 25.466 2.48e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00553 - - gmx:100813762 645.195