Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00551 ATGACTTCTCACAACAACAACAACATCAAAATCCATGAGCACTGCCATGTTGCTCCTCCTTCATCTGCAACCCAAACATCTCTCCCTCTCACTTTCTTTGACTTTTTCTGGGTCAGGTTTCATCCTGTTGAGCGTGTCTTCTTCTACTCCCTTCAATCAGATCCATCTTTTTTCTTCCACAAAGTGGTCCCAAAGCTCAAAACTTCACTCTCTCTCACCCTCCAACACTTCCTCCCTCTAGCAGGAAACATCGTTTGGCCTTCTGAATCATCAAAACCAGTGATCCAATACAACCCTTGTGATGGTGTTTCTCTTGTTATTGCAGAGTATGATGTTGACTTCAATCATATCGTGGACAATTCACCCCATGAAGCTGCTTTGTCTCGTTCTTTTGTACCCCACTTGGAATCAACTGATTCTTTTGCTTCTGTTATGTCCCTACAAATCACTTTGTTTCCAAAAACTGGGTTTTGCATAGGCATAAGTACCCACCATGCTGTTTTTGATGGAAAATCTTCAACTATGTTTCTTAAAGCTTGGGCTTCTCTATGTCAAACCAATCAAGAATCTCCATCTTTGGTTCCAGAGTTAGTTCCATCATTTGAGAGGGAAATCGTCGAAGACAAAGATCCAACAGGGCTTACGGCAAATGATTGGACAGAACTCTTATCCAAAATGTTCCCTGCTGAGAACACAAACGGGAGAAGCTTGAAGATTTTACCCTTCCAACCAAAACTTGAGGACTCAGTTCGAGCCACGTTTGAGCTCACACGTGAAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCCAAGTGGGACAAAGAATCAAAACTTTCTTCAAAGCCACCAACTTTATCATCATTTGTTCTCACATGTGCCTATGTGCTTGTTTGCTTTGCAAAAGCCATTCATGGAGTTGAAAAGGAGAGAGAGAAGTTTGGTTTTGCATTCACTGTGGATTGCAGGACCAGGTTAGAGCCTCCACTCCCTGATAACTATTTTGGAAATTGTGTGTGGGGCCATTTGGTGGATACACAGCCATTGGACTTTATAAAAGAAGATGGGGTCTTTGTTGTTGCTAAGAGCATATATGATAAAATAAAAATGTTTGGCAGTAAGGGAGTTTTTGAAGGAGCCAAGGATGCGTCTTCTAAATATTTGTCCTTGGCAAGTGAGGGTGTTGAAGTCCTGGGAGTGGCAGGGTCCAATAGATTTGGTGTTTATGGGATTGATTTTGGTTGGGGAAAGCCTATTAAGGTGGAGGTAATATCAGTGGATAGAGGTTCAACCATTGGCTTGGCAGAGAGCAAGGATGGGAAAGGTGGAGTTGAAGTTGGGCTGGTTCTTAATAAACATGTCATGGATCTCTTTATTACTTTATTTAGTGTGGAGGATTGTGCCTTGATTGATGAGAGCTAG 1419 0.4193 MTSHNNNNIKIHEHCHVAPPSSATQTSLPLTFFDFFWVRFHPVERVFFYSLQSDPSFFFHKVVPKLKTSLSLTLQHFLPLAGNIVWPSESSKPVIQYNPCDGVSLVIAEYDVDFNHIVDNSPHEAALSRSFVPHLESTDSFASVMSLQITLFPKTGFCIGISTHHAVFDGKSSTMFLKAWASLCQTNQESPSLVPELVPSFEREIVEDKDPTGLTANDWTELLSKMFPAENTNGRSLKILPFQPKLEDSVRATFELTREDLEKIKKRVLSKWDKESKLSSKPPTLSSFVLTCAYVLVCFAKAIHGVEKEREKFGFAFTVDCRTRLEPPLPDNYFGNCVWGHLVDTQPLDFIKEDGVFVVAKSIYDKIKMFGSKGVFEGAKDASSKYLSLASEGVEVLGVAGSNRFGVYGIDFGWGKPIKVEVISVDRGSTIGLAESKDGKGGVEVGLVLNKHVMDLFITLFSVEDCALIDES* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00551 472 Gene3D - 4 225 IPR023213 -
Rops8g00551 472 FunFam Phenolic glucoside malonyltransferase 1 246 464 - -
Rops8g00551 472 Pfam Transferase family 9 457 - -
Rops8g00551 472 Gene3D - 245 464 IPR023213 -
Rops8g00551 472 PANTHER - 9 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00551 Rops-Chr8 11448157 11449772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00551 9 457 Monolignol Biosynthesis Gene Families AT5G48930 24.130 1.18e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00551 - - tpra:123889238 650.203