Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00550 ATGAATGTTGACTGCAGGACTCGTTTAGAGCCACCACTTCCTCCAACATATTTTGGAAATTGTATTGGTGGCAGAGTGGTAGTTGTTGAAACAAGAGAGTTATTGGGAGAAGATGAACTAGTTGTGGCTGTGGAAGCACTGAGTGAAGCTTTGGAAACCTTGAAGGATGGAGTGCTGAATGGAGCAGAAAATTGGTCATCATGGTTGCTTGATGGTCTTTGCACTGATGTCAAGACAATTGGCATTGTCGGGTCGCCGAAGTTTGAGGTTTACAATACTGATTTTGGTTTGGGAAGACCAAAGAAGGTGGAGATGACGTCTATAGATAGAACTGGTGCATTTTGTCTTTCAGATAGCAGGAATGGTGATGGAGTTGAGATTGGTTTTGTGTCCCAAAAAGGAGCAATGGAGACCTTTGCTTCTCTCTTTGTCGAAGGCCTTCAATCCCTATTTGTGTGGGTAGATTCAGTTGCCTTTCACGAGTGA 486 0.4362 MNVDCRTRLEPPLPPTYFGNCIGGRVVVVETRELLGEDELVVAVEALSEALETLKDGVLNGAENWSSWLLDGLCTDVKTIGIVGSPKFEVYNTDFGLGRPKKVEMTSIDRTGAFCLSDSRNGDGVEIGFVSQKGAMETFASLFVEGLQSLFVWVDSVAFHE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00550 161 Gene3D - 1 150 IPR023213 -
Rops8g00550 161 PANTHER - 2 149 - -
Rops8g00550 161 Pfam Transferase family 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00550 Rops-Chr8 11428080 11428565 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00550 4 145 Monolignol Biosynthesis Gene Families AT5G48930 28.000 1.17e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00550 - - gmx:100805184 240.736