Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00549 ATGAAAACCATAGAAGTTTTCAGAGTGGCGCCAACTTTGGGATCAGAAGAATTACCTACTCAAACATCACTTCCTCTCACCTTCTTTGACATATTATGGTTAAGGTTACCTCCTGTTCAACGTGTTTTCTTCTATGAATTCCCTCACCCAACCCCACTTTTCTTTGATACCCTTCTTCCCAAACTCAAAAGTTCCCTTTCTCTTGCACTTAGTTACTTCTACCCTCTTGCTGGCCACCTTACTTGGCCCCTTGAATCCAACAAACCCATCATCAATTACACCAAAGGTGACACCGTTTCCCTCACTGTGGCTGAATCTGATGCTGATTTCAACCATCAAGCTGGTACCAATCTATGTGATGCTACACAGAGTCACCATCTTTTACCCCACTTGATCATATCCCATGATCAAGCTACTGTATTGGCTCTCCAGGTCACTCTATTTCCAAACTCTGGATTTGCCATTGGAGTTACCTCACACCATGCTGTTCTAGATGGCAAAACTTCAACATCTTTTATAAAATCATGGGCTTATCTTTGTAGAGAATCACCCTCTTCTTTGCCGCCTGAATTGATTCCTTTCTATGACAGGGAAGTAATCAAAGATCCAAGTGAAGTAGAGACAAAATATTTGAGTGATTGGTTAAAGCAGGGTGGACCCAACAACAGAAGCCTAATGGTTTGGGATCTACAAGTTCCAGAAGAGAATCGGTTAGAGCCACGACTTCCTCCAACATATTTTGGAAATTGTGTTGGTAGCAGACTTGTAATTGTGGAAACAACAAAACTATTGGGAGAAGATGGACTAATTGTGGCTGCTGAAGCACTGAGTGAAGCCTTGGAAACTTTGAAGGATGGAGTGCTGAGTGGAGTAGAAGATTGGTCGTCATGGTTGCTTGATGGTCTTTTCACTGATGTGAAGACAATTGGCGCTGCTGGGTCTCCAAGGTTTGAGGTTTACAATAATGATTTTGGTTGGGGAAGACCAAAGAAAGTGGACATGGCATCTATAGATAGAACTGGAGCATTATGTCTTTCTGACAGCAAAAATGGTGATGGAGTTGAGGTAAGTTTTGTGTCCAATAAAGTAGCAATGGAGACCTTTGCTTCTCTCTTTGTCAAAGGCCTTGCATCTTGA 1137 0.4222 MKTIEVFRVAPTLGSEELPTQTSLPLTFFDILWLRLPPVQRVFFYEFPHPTPLFFDTLLPKLKSSLSLALSYFYPLAGHLTWPLESNKPIINYTKGDTVSLTVAESDADFNHQAGTNLCDATQSHHLLPHLIISHDQATVLALQVTLFPNSGFAIGVTSHHAVLDGKTSTSFIKSWAYLCRESPSSLPPELIPFYDREVIKDPSEVETKYLSDWLKQGGPNNRSLMVWDLQVPEENRLEPRLPPTYFGNCVGSRLVIVETTKLLGEDGLIVAAEALSEALETLKDGVLSGVEDWSSWLLDGLFTDVKTIGAAGSPRFEVYNNDFGWGRPKKVDMASIDRTGALCLSDSKNGDGVEVSFVSNKVAMETFASLFVKGLAS* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00549 378 Gene3D - 2 225 IPR023213 -
Rops8g00549 378 PANTHER - 2 219 - -
Rops8g00549 378 Gene3D - 235 377 IPR023213 -
Rops8g00549 378 Pfam Transferase family 236 370 - -
Rops8g00549 378 Pfam Transferase family 15 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00549 Rops-Chr8 11415500 11416947 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00549 217 353 Monolignol Biosynthesis Gene Families AT5G48930 27.083 7.00e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00549 - - gmx:100805184 355.91