Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00543 ATGAAAACCATTGAAGTTTTCAGAGTAGCACCGACTTTTGTCTCAGAAGAGTTACCTACTGAAACATCACTTCCTCTCACCTTCTTTGACATACTATGGCTAAGGATACCTCCTTTTCAACGTGTTTTCTTCTATGAATTCCCTCACCCAATCCCACTCTTCTTTGATACCCTTCTTCCCAAACTCAAAAGTTCCCTTTCTCTTGCCCTTGGTTACTTCTACCCTCTTGCTAGCCACCTTACTTGGCCCCTTGAATCCAACAAACCCCTTATCAAATACACCAAAGGTGACACTGTTTCCTTCACTGTGGCTGAATCTGATGCTGATTTCAACCACTTAGCAGGTACTGATCTATGTGAAGCTACAAAAATTCACCATCTTTTACCACAGCTGACCATATCCCATGATCAAGCTACTGTATTGGCTCTCCAGGTCACTCTATTTCCAAATTATGGATTTTCCATTGGTGTTATCTCACACCATGCTGTTCAAGATGGCAAAACTTCAGCATCGTTTATCAAATCATGGGCTTATCTTTGTAGAGAATCAACCTCTTCTTTGCCACCTGAATTGAGTCCTTTCTATAACAGGGAAGTAATCAAAGACCCAAATAAGTTAGAGGCAAAATATGTGAGTGATTGGTTGAAGCAGGGTGAACCCAACAACAGAAGCCTCATGGTTTGGGATCGCCAAGCTCCAGAAGAGTCGACTAGAGGATTATTTCACTTGTCTCGCTCAGATATTGAAAAGCTCAAACAATTTGCAGTGTCCAAGCAAAAAGGGAAGAACCTTCACTTGTCAACTTTTGTTTTATCTTTTGCCTATGGATTGGTTTGCAAAGTGAAAGCAGAGGAAATTAAAACCAAGAGAATTCTTTTCGTTTTGAGTATTGACTGCAGGCATCGGTTAGAGCCACCAGTTCCTCCAACATATTTTGGAAATTGTGTTGGTTGCAGACTTGTAATTGTAGAAACAAGAGAATTATTGGGAGAAGATGGACTAATTGTAGCTGTGGAAGCACTGAGTGAAACCTTGGAAACTTTGAAGGATGGAGTGCTGAGTGGAGCAGAAGATTGGTCATCATGGTTGCTTGATGGTATTTTCACTGATGTGAAGACAATTTGCGCTGCTGGGTCTCCAAGGTTTGAGGTTTACAACAATGATTTTGGTTGGGGAAGACCAAAGAAGGTGGACATGGCATCGATAGATAGAAATGGGGCAATAGGTCTTTCAGACAGCAAAAATGGTGATGGAGTTGAGGTAAGTTTTGTGTCCAATAAAGTAGCAATGGAGACCTTTGCTTCTCTTTTTGTCAAAGGCCTTGCAACTTGA 1332 0.4129 MKTIEVFRVAPTFVSEELPTETSLPLTFFDILWLRIPPFQRVFFYEFPHPIPLFFDTLLPKLKSSLSLALGYFYPLASHLTWPLESNKPLIKYTKGDTVSFTVAESDADFNHLAGTDLCEATKIHHLLPQLTISHDQATVLALQVTLFPNYGFSIGVISHHAVQDGKTSASFIKSWAYLCRESTSSLPPELSPFYNREVIKDPNKLEAKYVSDWLKQGEPNNRSLMVWDRQAPEESTRGLFHLSRSDIEKLKQFAVSKQKGKNLHLSTFVLSFAYGLVCKVKAEEIKTKRILFVLSIDCRHRLEPPVPPTYFGNCVGCRLVIVETRELLGEDGLIVAVEALSETLETLKDGVLSGAEDWSSWLLDGIFTDVKTICAAGSPRFEVYNNDFGWGRPKKVDMASIDRNGAIGLSDSKNGDGVEVSFVSNKVAMETFASLFVKGLAT* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00543 443 Pfam Transferase family 13 435 - -
Rops8g00543 443 Gene3D - 2 226 IPR023213 -
Rops8g00543 443 SUPERFAMILY CoA-dependent acyltransferases 235 401 - -
Rops8g00543 443 Gene3D - 231 443 IPR023213 -
Rops8g00543 443 PANTHER - 2 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00543 Rops-Chr8 11331493 11333013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00543 34 418 Monolignol Biosynthesis Gene Families AT5G48930 27.068 6.17e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00543 - - gmx:100805184 659.062