Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00538 ATGGGTAATCTCTGTGCTCTTTTGAAACCCAAACCAGCACCACCCACCACCAAAAAGCGTTCTTCCAGTAATCGGTGGTCATCATCGTCTCGAAGAGGGAAGAAGCTCGATGATGCATCGATTCGAGAACAGGCTATAGCTGCAGCCATACTTTTCAAACAGCATCAGCAACAACAGTTTGATCGATCAAGTTCATTACGATACCCCAATGGGGTGTCAAAGAAGAATAATAGTAACGCTTTGCCAAGAAGTTCTAGTTCAAGGGCTAGGTCTCTCACTGACCCTCTTCTTCAACCTCATCAGCTTCTTAATCAGGGTGTAAAGGTTGATGATCTTGAGACCAATCATTTTGTCCTTGTTCATGGAGGTGGCTTTGGGGCCTGGTGTTGGTACAAAACTATAGCACTTCTTGAAGAAAGTGGTTCTAAAGTAGCTGCCATAGATTTAACTGGTTCTGGAGTTCATTCATTTGATACAAACAACATTACAAGTCTGTCACAATACGTGAAGCCTCTTACTGACTTCCTTGAAAAACTTCCTGAAGGTGAAAAGGTGATCTTGGTTGGACATGATTTTGGTGGGGCATGCATATCATATGCAATGGAGTTGTTTCCTCTTAAGATTTCCAAGGCCATCTTCATTGCTGCAGCAATGCTGACTAGCGGACAAAGTACTCTTGATATCATTTCTCAACAGGCAGGTTCAGATGATCTTATGCAACAGGCTCAGATATTTTTGTATGCTAATGGGAATGATCGCCCTCCCACTTCTTTTGATCTGGACAAGTCATTGTTAAGGGATTTGTTATTCAACCATAGTCCCACCAAAGATGTTGCATTAGCATCCGTCTCAATGAGGCCAGTACCATTTGCTCCAGTTTTGGAGAAACTTTCCCTTTCAGACATGAAATATGGGTATGTAAGGCGGTTTTATATAGAAACTATTGAAGACAATGCCATACCCTTCTCACTCCAAGAGAACATGATAAATGCAAGCCCCCCAGAAAAGGTTTTCTGTCTGAAGGGTGCTGATCATTCTCCCTTTTTCTCAAAGCCTCAAGCTCTCCATAAGTTACTGGTAGAAATCTCAAAGATCCTCTGA 1101 0.4233 MGNLCALLKPKPAPPTTKKRSSSNRWSSSSRRGKKLDDASIREQAIAAAILFKQHQQQQFDRSSSLRYPNGVSKKNNSNALPRSSSSRARSLTDPLLQPHQLLNQGVKVDDLETNHFVLVHGGGFGAWCWYKTIALLEESGSKVAAIDLTGSGVHSFDTNNITSLSQYVKPLTDFLEKLPEGEKVILVGHDFGGACISYAMELFPLKISKAIFIAAAMLTSGQSTLDIISQQAGSDDLMQQAQIFLYANGNDRPPTSFDLDKSLLRDLLFNHSPTKDVALASVSMRPVPFAPVLEKLSLSDMKYGYVRRFYIETIEDNAIPFSLQENMINASPPEKVFCLKGADHSPFFSKPQALHKLLVEISKIL* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00538 366 FunFam putative methylesterase 11, chloroplastic 111 365 - -
Rops8g00538 366 SUPERFAMILY alpha/beta-Hydrolases 116 361 IPR029058 -
Rops8g00538 366 Gene3D alpha/beta hydrolase 109 364 IPR029058 -
Rops8g00538 366 MobiDBLite consensus disorder prediction 1 38 - -
Rops8g00538 366 Pfam Alpha/beta hydrolase family 117 355 IPR000073 -
Rops8g00538 366 PANTHER METHYLESTERASE FAMILY MEMBER 114 363 IPR045889 -
Rops8g00538 366 MobiDBLite consensus disorder prediction 60 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00538 Rops-Chr8 11242019 11247438 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00538 1 188 Miscellaneous Gene Families AT3G29770 57.746 1.01e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00538 - - gmx:100818550 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g00538 8 11242019 11247438 Rops8g00538 8 11242019 11247438 ECH