Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00512 ATGTCCACGACCCACGTCAGCACGGTCGTGAAGGGTAGCCTTGGGTATTTGGACCCGGAATATTACAAGCGTCAAAGGTTGACTCTCAAGTCTGACGTGTACCCATTCGGTGTGGTACTTCTTGAGGTGTTGTGTGCGAGACCACCTTTGGTTCGTACGTTAGACAAGCACGAGGCTAATTTGGTGCATTGGATTCAGAGATGTTCTGATAAAGGAGAGATTGAGAAAACGGTGGATCCATTTGTAAAGGGTTCTATCTCGGCTGAGTGTTTGAAATGTTACAGCCAAATGGCATTGAGTTGTTTGCTTGATGATGGGAATCAACGGCCCTCAATGAGTGATGTGGTTGGAGCATTGGAATTTGCTTTGCAGTTGGTGGAGAGTGAAGAAGACGGCAAGACCCAAGAAGGGGGTAACAGTGGGCAAACATCACGGTTATTACCACAGTTTATTACTGATGAAGAGAGTGATGTGCGTTTCACCAGTACTGATTACACCGGGTCCCAGACCAGCAAGGTCACCACGGTCTCAGCCAGTAGTGAGGAACAACCTTTGGTTTCTGCCACGGTGTTCTCTGAGATTGGGAATCCAACAGCACGAAAGCATAGGAGGGGGTCAGACTAA 624 0.4808 MSTTHVSTVVKGSLGYLDPEYYKRQRLTLKSDVYPFGVVLLEVLCARPPLVRTLDKHEANLVHWIQRCSDKGEIEKTVDPFVKGSISAECLKCYSQMALSCLLDDGNQRPSMSDVVGALEFALQLVESEEDGKTQEGGNSGQTSRLLPQFITDEESDVRFTSTDYTGSQTSKVTTVSASSEEQPLVSATVFSEIGNPTARKHRRGSD* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00512 207 PANTHER OS07G0166700 PROTEIN 3 125 IPR045272 GO:0004714|GO:0006468
Rops8g00512 207 SUPERFAMILY Protein kinase-like (PK-like) 4 117 IPR011009 -
Rops8g00512 207 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Rops8g00512 207 MobiDBLite consensus disorder prediction 160 179 - -
Rops8g00512 207 Pfam Protein tyrosine and serine/threonine kinase 8 118 IPR001245 GO:0004672|GO:0006468
Rops8g00512 207 MobiDBLite consensus disorder prediction 161 179 - -
Rops8g00512 207 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00512 Rops-Chr8 10087854 10090763 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00512 4 200 Receptor kinase-like Gene Family AT3G51550 46.009 5.40e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00512 PK_Tyr_Ser-Thr 7.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00512 - - lja:Lj0g3v0259209.1 248.44