Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00509 ATGAACGAGCTTGAGTTGTTCTCTCAACTTCGACACGTTCATTTGGTGTCCCTCACTGGTTACTGCAACGACGGCATTGAAATGATCCTCGTCTATGACTTCATGCCACGTGGCACTCTCCATGAGTATCTCTATCACTCCGATAACCCACCCCTTTCGTGGAAGTGTAGGCTCGAGATCTTATTGGGTGCTGCAAGAGGGCTGCATTATCTTCACGCAGGTGCGAAGCACAACATCATTCACCGTGATGTTAAGAGCACCAACATCTTGTTGGATGTGAAATGGGTGGCTAAGGTTTCTGATTTCGATTTTTCCAAGGTGGGACCCACGGGGATGTCCCCGACCCACGTCAGCACTGTCGTGAAGGGTAGCCTTGGGTATTTGGACCTAGAATATTACAAGTGTCAAAGGTTGACTCTCAAGTCTGACGTGTACTCATTCGGTGTGGTACTTCTTGAGGTGTTATGTGCGAGACCACCTTTGGTTCGTACGTTAGACAAGCATGAAGCTAATTTGGTACATTGGACTCAGAGATGTTATGATGAAGGAGAGATTGAGAAAATGGTGGATCCATTTGTAAAGGGTTCTATTTCGGCTGAGTGTTAG 606 0.4686 MNELELFSQLRHVHLVSLTGYCNDGIEMILVYDFMPRGTLHEYLYHSDNPPLSWKCRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILLDVKWVAKVSDFDFSKVGPTGMSPTHVSTVVKGSLGYLDLEYYKCQRLTLKSDVYSFGVVLLEVLCARPPLVRTLDKHEANLVHWTQRCYDEGEIEKMVDPFVKGSISAEC* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00509 201 Gene3D Transferase(Phosphotransferase) domain 1 36 201 - -
Rops8g00509 201 Pfam Protein tyrosine and serine/threonine kinase 1 170 IPR001245 GO:0004672|GO:0006468
Rops8g00509 201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Rops8g00509 201 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00509 201 SUPERFAMILY Protein kinase-like (PK-like) 1 186 IPR011009 -
Rops8g00509 201 PANTHER OS07G0166700 PROTEIN 2 201 IPR045272 GO:0004714|GO:0006468
Rops8g00509 201 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Rops8g00509 201 SMART serkin_6 1 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00509 Rops-Chr8 9814879 9815484 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00509 3 201 Receptor kinase-like Gene Family AT3G51550 65.327 2.56e-87 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00509 PK_Tyr_Ser-Thr 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00509 - - lja:Lj0g3v0259209.1 318.931