Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00507 ATGGCTCCTGCTTACATGGCATTTCTCCGATTCGTGGGTGATGAAAGAGAGGCCAGGAACTACAACTACAGCTTGGAGGTGGGAGGAAATGGACGCAAACTAACTTTTGAAGGGAGTCCGAGAAGCATCAGAGGTAGCCATAAGAAAGTCATAGACAGTCATGATGGCCTCATCATATACCGTAACATGGCACTATTCTTCTCAGGTGGGGACAGGAAAGAGTTGAAGCCACGAGCAACAGCAGAACCCTGA 252 0.4841 MAPAYMAFLRFVGDEREARNYNYSLEVGGNGRKLTFEGSPRSIRGSHKKVIDSHDGLIIYRNMALFFSGGDRKELKPRATAEP* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00507 83 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 78 IPR008974 GO:0005515
Rops8g00507 83 Pfam Seven in absentia protein family 3 76 IPR018121 GO:0005737|GO:0006511|GO:0007275
Rops8g00507 83 SUPERFAMILY TRAF domain-like 3 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00507 Rops-Chr8 9741590 9741841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00507 1 81 C3H Transcription Factor Family AT2G41980 67.901 7.91e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00507 K04506 - gmx:100792687 149.828