Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00498 ATGATTACCATTGATGAATTAAACAATGTCGACACATGTCCTGGAATTGATGATATTGGTAGTGGTGGTGAGACATTGCATTATTATGGTACAAGTGGAGACCCAGAAGTAGGGATGTCGTTTACTTCTGAAGAAGACTTGAAATCATTTTATTCATCACATGCTTGTAGAAAGGGTTTTGGATGGAAGATAAGGACTACCAAAAAGGCAGATGATGGGAAAATAAATTACATCATACTATCATGCTCAAGAGAGGGTAATCGTAAATCCTCCATATCAACTACATTGAAGACACTTCCAACAAAAGCAAAAAATTGTAAGGCCAAGTTAACTGCTAGGTTAGAAGAAGATGGATGA 357 0.3669 MITIDELNNVDTCPGIDDIGSGGETLHYYGTSGDPEVGMSFTSEEDLKSFYSSHACRKGFGWKIRTTKKADDGKINYIILSCSREGNRKSSISTTLKTLPTKAKNCKAKLTARLEEDG* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00498 118 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 118 - -
Rops8g00498 118 Pfam FAR1 DNA-binding domain 49 118 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00498 Rops-Chr8 9346670 9347026 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops8g00498 FAR1 6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00498 - K01807 psat:127103495 113.62