Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g00492 ATGGTTCTCCAATGTTTGGGTTTGTGCCATTCAAAGCATATCGAGTCTGGGTTCCCATCATCTGGTCCAACAGTAATAGAAGAACTATGCCATCATTTTTCTCTGGCTGATCTTAGGAAATCAACCAACAACTTTGACGAAACTCGAATAATTGGAGAGGGAGGCTTTAATACATTTGTATACTGTACAGTATACAAAGGTTGTCTCCAGCATAATGTTGCCACAGATTGTACAGTCGCGGTGAAGCGAATGAAGGGTCAAAGTGTATGGAGATTGGAAGACTTCAAGAATGAAATTGAGTTGCTCTGTCAGCTTCGTCACCCTAATTTGGTCTCTCTTATAGGATTCTGCAACCACAAAGATGAGAATATTATTGTGTACCAATACATGTCCAATGGATCTCTCCATAATCATTTACACAATAGGGAGATGGAACCACTCTCATGGAAGAAAAGGCTAGATATCTGCATAGGAGCAGCACGTGGGGTGCACTACCTCCACACAGGAGCCAAGCGCACCATCATTCACCGTGACATCAAACCCGCTACCATTCTTTTGGATAGCAACATGGTGCCCAAAATCTCAAGTTTTGGGCTTTGCTTGCAAGGACCATTGTTTACATCAAAGCCAAAACCTATTGAATTAGACCGAATTATAGGTACATATGAATTCTTAGCTCCAGAGTATGCCATAATGGGCAGATTGACAGATAGAAGTGACGTTTATTCCTTTGGCGTGGTTCTAATTGAAGTGATATGTGCAAAGTCATATAGAGAAATTTCAAGGGAGATGATCGAGTTTCAAAGAGAAGAATTAGAAACGATTGTTGGTTCGGAGATGAGCGAGCTTCCAAGTGAAGAATTTGGAACGGCTATTTGTTCGGAGATGAGCCAGCTTCCAAGTGCAGAATCTGAAACGCCTATTCGTTCTGCGGATACGCATATGTCTCACGTTATACTAAGGCTCCGAGCTGGGGAGATTAGTGATCCGATTCTTTCAGGAAAAATTGCACCAGAGTGTTTGGAATTATATATAGATATCATAGACCGCTGCGTGAAGTTTGAACCAAATGAGCGACCAGCAATGGGCGAAGTAGAGGTGGAACTTGAACATGCTCTGACTTTGCAACAGGAAGCAGATGCAAGGAACACTGGTGGTGATTATTGCTTATTATCCCCCAGCATTACTCAACCTTAA 1197 0.4227 MVLQCLGLCHSKHIESGFPSSGPTVIEELCHHFSLADLRKSTNNFDETRIIGEGGFNTFVYCTVYKGCLQHNVATDCTVAVKRMKGQSVWRLEDFKNEIELLCQLRHPNLVSLIGFCNHKDENIIVYQYMSNGSLHNHLHNREMEPLSWKKRLDICIGAARGVHYLHTGAKRTIIHRDIKPATILLDSNMVPKISSFGLCLQGPLFTSKPKPIELDRIIGTYEFLAPEYAIMGRLTDRSDVYSFGVVLIEVICAKSYREISREMIEFQREELETIVGSEMSELPSEEFGTAICSEMSQLPSAESETPIRSADTHMSHVILRLRAGEISDPILSGKIAPECLELYIDIIDRCVKFEPNERPAMGEVEVELEHALTLQQEADARNTGGDYCLLSPSITQP* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g00492 398 FunFam Os07g0541700 protein 130 221 - -
Rops8g00492 398 Gene3D Transferase(Phosphotransferase) domain 1 130 388 - -
Rops8g00492 398 PANTHER OS07G0166700 PROTEIN 30 376 IPR045272 GO:0004714|GO:0006468
Rops8g00492 398 Gene3D Phosphorylase Kinase; domain 1 13 129 - -
Rops8g00492 398 ProSiteProfiles Protein kinase domain profile. 45 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g00492 398 Pfam Protein tyrosine and serine/threonine kinase 49 265 IPR001245 GO:0004672|GO:0006468
Rops8g00492 398 FunFam Receptor-like protein kinase ANXUR2 9 129 - -
Rops8g00492 398 SUPERFAMILY Protein kinase-like (PK-like) 19 368 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g00492 Rops-Chr8 9087622 9089543 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g00492 28 385 Receptor kinase-like Gene Family AT3G51550 38.997 2.87e-72 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Rops8g00492 PK_Tyr_Ser-Thr 7.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g00492 - - lja:Lj0g3v0196439.1 381.719